Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CD3DP04234 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CD3DP04234 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC12.48□□□□□ -0.41
CD3DP04234 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CD3DP04234 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CD3DP04234 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
CD3DP04234 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC12.48□□□□□ -0.41
CD3DP04234 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
CD3DP04234 AL138799.1-201ENST00000448213 1675 ntBASIC12.48□□□□□ -0.41
CD3DP04234 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
CD3DP04234 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
CD3DP04234 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CD3DP04234 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CD3DP04234 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
CD3DP04234 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CD3DP04234 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CD3DP04234 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CD3DP04234 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CD3DP04234 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC12.48□□□□□ -0.41
CD3DP04234 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CD3DP04234 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CD3DP04234 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC12.48□□□□□ -0.41
CD3DP04234 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC12.48□□□□□ -0.41
CD3DP04234 RERG-209ENST00000546331 1383 ntTSL 2 BASIC12.48□□□□□ -0.41
CD3DP04234 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
CD3DP04234 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CD3DP04234 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
CD3DP04234 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
CD3DP04234 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CD3DP04234 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CD3DP04234 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC12.48□□□□□ -0.41
CD3DP04234 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
CD3DP04234 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CD3DP04234 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
CD3DP04234 RN7SL618P-201ENST00000477850 296 ntBASIC12.48□□□□□ -0.41
CD3DP04234 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC12.48□□□□□ -0.41
CD3DP04234 SDHAP3-202ENST00000515467 728 ntBASIC12.48□□□□□ -0.41
CD3DP04234 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC12.48□□□□□ -0.41
CD3DP04234 PUS1-205ENST00000535067 838 ntTSL 3 BASIC12.48□□□□□ -0.41
CD3DP04234 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC12.48□□□□□ -0.41
CD3DP04234 AC010336.2-201ENST00000564226 506 ntBASIC12.48□□□□□ -0.41
CD3DP04234 DUX4L47-201ENST00000566374 394 ntBASIC12.48□□□□□ -0.41
CD3DP04234 AC051619.7-201ENST00000568314 623 ntBASIC12.48□□□□□ -0.41
CD3DP04234 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CD3DP04234 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CD3DP04234 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC12.48□□□□□ -0.41
CD3DP04234 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CD3DP04234 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC12.48□□□□□ -0.41
CD3DP04234 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC12.48□□□□□ -0.41
CD3DP04234 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC12.48□□□□□ -0.41
CD3DP04234 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
CD3DP04234 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CD3DP04234 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC12.48□□□□□ -0.41
CD3DP04234 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
CD3DP04234 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
CD3DP04234 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CD3DP04234 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
CD3DP04234 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CD3DP04234 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CD3DP04234 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CD3DP04234 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CD3DP04234 KHSRPP1-201ENST00000427983 1768 ntBASIC12.48□□□□□ -0.41
CD3DP04234 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CD3DP04234 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CD3DP04234 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CD3DP04234 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CD3DP04234 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CD3DP04234 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CD3DP04234 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CD3DP04234 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC12.48□□□□□ -0.41
CD3DP04234 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CD3DP04234 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC12.48□□□□□ -0.41
CD3DP04234 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CD3DP04234 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CD3DP04234 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CD3DP04234 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CD3DP04234 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CD3DP04234 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
CD3DP04234 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CD3DP04234 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CD3DP04234 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC12.47□□□□□ -0.41
CD3DP04234 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CD3DP04234 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CD3DP04234 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CD3DP04234 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
CD3DP04234 ELL2P1-201ENST00000413990 1906 ntBASIC12.47□□□□□ -0.41
CD3DP04234 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CD3DP04234 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
CD3DP04234 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CD3DP04234 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
CD3DP04234 TUBB8P4-201ENST00000511806 1324 ntBASIC12.47□□□□□ -0.41
CD3DP04234 MRPL37P1-201ENST00000592451 1337 ntBASIC12.47□□□□□ -0.41
CD3DP04234 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC12.47□□□□□ -0.41
CD3DP04234 AGAP12P-201ENST00000585227 2359 ntBASIC12.47□□□□□ -0.41
CD3DP04234 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CD3DP04234 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC12.47□□□□□ -0.41
CD3DP04234 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CD3DP04234 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC12.47□□□□□ -0.41
CD3DP04234 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CD3DP04234 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms