Protein–RNA interactions for Protein: P01574

IFNB1, Interferon beta, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNB1P01574 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
IFNB1P01574 AC093433.1-201ENST00000458048 571 ntBASIC15.26■□□□□ 0.03
IFNB1P01574 API5-211ENST00000534695 560 ntTSL 5 BASIC15.26■□□□□ 0.03
IFNB1P01574 AC131206.1-201ENST00000538078 1211 ntBASIC15.26■□□□□ 0.03
IFNB1P01574 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.26■□□□□ 0.03
IFNB1P01574 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.26■□□□□ 0.03
IFNB1P01574 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.26■□□□□ 0.03
IFNB1P01574 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC15.26■□□□□ 0.03
IFNB1P01574 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC15.26■□□□□ 0.03
IFNB1P01574 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.26■□□□□ 0.03
IFNB1P01574 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
IFNB1P01574 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
IFNB1P01574 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
IFNB1P01574 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
IFNB1P01574 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
IFNB1P01574 AC215219.1-201ENST00000400706 1817 ntBASIC15.26■□□□□ 0.03
IFNB1P01574 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
IFNB1P01574 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
IFNB1P01574 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
IFNB1P01574 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
IFNB1P01574 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
IFNB1P01574 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
IFNB1P01574 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC15.26■□□□□ 0.03
IFNB1P01574 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
IFNB1P01574 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
IFNB1P01574 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
IFNB1P01574 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
IFNB1P01574 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
IFNB1P01574 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
IFNB1P01574 AC011498.7-201ENST00000624986 2027 ntBASIC15.26■□□□□ 0.03
IFNB1P01574 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
IFNB1P01574 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
IFNB1P01574 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
IFNB1P01574 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC15.25■□□□□ 0.03
IFNB1P01574 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC15.25■□□□□ 0.03
IFNB1P01574 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
IFNB1P01574 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
IFNB1P01574 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
IFNB1P01574 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
IFNB1P01574 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC15.25■□□□□ 0.03
IFNB1P01574 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
IFNB1P01574 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
IFNB1P01574 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
IFNB1P01574 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
IFNB1P01574 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC15.25■□□□□ 0.03
IFNB1P01574 AL138725.1-201ENST00000407347 1314 ntBASIC15.25■□□□□ 0.03
IFNB1P01574 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
IFNB1P01574 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
IFNB1P01574 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC15.25■□□□□ 0.03
IFNB1P01574 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
IFNB1P01574 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
IFNB1P01574 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
IFNB1P01574 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC15.25■□□□□ 0.03
IFNB1P01574 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.25■□□□□ 0.03
IFNB1P01574 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.25■□□□□ 0.03
IFNB1P01574 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
IFNB1P01574 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC15.25■□□□□ 0.03
IFNB1P01574 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
IFNB1P01574 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.25■□□□□ 0.03
IFNB1P01574 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
IFNB1P01574 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC15.25■□□□□ 0.03
IFNB1P01574 LINC02560-201ENST00000596379 459 ntBASIC15.25■□□□□ 0.03
IFNB1P01574 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
IFNB1P01574 WFDC1-204ENST00000613603 549 ntBASIC15.25■□□□□ 0.03
IFNB1P01574 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
IFNB1P01574 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
IFNB1P01574 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
IFNB1P01574 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
IFNB1P01574 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.25■□□□□ 0.03
IFNB1P01574 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC15.25■□□□□ 0.03
IFNB1P01574 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
IFNB1P01574 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC15.25■□□□□ 0.03
IFNB1P01574 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC15.25■□□□□ 0.03
IFNB1P01574 AC020910.5-201ENST00000623668 1865 ntBASIC15.25■□□□□ 0.03
IFNB1P01574 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
IFNB1P01574 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
IFNB1P01574 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC15.24■□□□□ 0.03
IFNB1P01574 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
IFNB1P01574 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
IFNB1P01574 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
IFNB1P01574 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
IFNB1P01574 WARS-203ENST00000358655 2466 ntTSL 2 BASIC15.24■□□□□ 0.03
IFNB1P01574 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
IFNB1P01574 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
IFNB1P01574 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
IFNB1P01574 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
IFNB1P01574 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.24■□□□□ 0.03
IFNB1P01574 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
IFNB1P01574 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC15.24■□□□□ 0.03
IFNB1P01574 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
IFNB1P01574 AC011840.2-201ENST00000563063 1520 ntBASIC15.24■□□□□ 0.03
IFNB1P01574 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
IFNB1P01574 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC15.24■□□□□ 0.03
IFNB1P01574 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
IFNB1P01574 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
IFNB1P01574 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
IFNB1P01574 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
IFNB1P01574 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC15.24■□□□□ 0.03
IFNB1P01574 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC15.24■□□□□ 0.03
IFNB1P01574 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms