Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC11.66□□□□□ -0.54
IFNA1P01562 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
IFNA1P01562 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
IFNA1P01562 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
IFNA1P01562 AL391647.1-201ENST00000395664 511 ntBASIC11.66□□□□□ -0.54
IFNA1P01562 AC142381.1-201ENST00000426099 345 ntBASIC11.66□□□□□ -0.54
IFNA1P01562 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC11.66□□□□□ -0.54
IFNA1P01562 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC11.66□□□□□ -0.54
IFNA1P01562 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC11.66□□□□□ -0.54
IFNA1P01562 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
IFNA1P01562 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC11.66□□□□□ -0.54
IFNA1P01562 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC11.66□□□□□ -0.54
IFNA1P01562 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
IFNA1P01562 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC11.66□□□□□ -0.54
IFNA1P01562 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC11.66□□□□□ -0.54
IFNA1P01562 IFNL4P1-201ENST00000607083 540 ntBASIC11.66□□□□□ -0.54
IFNA1P01562 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC11.66□□□□□ -0.54
IFNA1P01562 AC117500.6-201ENST00000624871 588 ntBASIC11.66□□□□□ -0.54
IFNA1P01562 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC11.66□□□□□ -0.54
IFNA1P01562 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
IFNA1P01562 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
IFNA1P01562 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC11.66□□□□□ -0.54
IFNA1P01562 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC11.66□□□□□ -0.54
IFNA1P01562 HDLBP-204ENST00000391976 4489 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
IFNA1P01562 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC11.66□□□□□ -0.54
IFNA1P01562 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
IFNA1P01562 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC11.66□□□□□ -0.54
IFNA1P01562 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
IFNA1P01562 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
IFNA1P01562 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
IFNA1P01562 TBL1X-202ENST00000380961 4674 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
IFNA1P01562 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
IFNA1P01562 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
IFNA1P01562 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
IFNA1P01562 ZNF646-201ENST00000300850 6892 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
IFNA1P01562 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC11.66□□□□□ -0.54
IFNA1P01562 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC11.66□□□□□ -0.54
IFNA1P01562 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
IFNA1P01562 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
IFNA1P01562 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC11.66□□□□□ -0.54
IFNA1P01562 FAM225B-201ENST00000423546 5629 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
IFNA1P01562 PBX1-203ENST00000420696 6636 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
IFNA1P01562 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC11.65□□□□□ -0.54
IFNA1P01562 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
IFNA1P01562 NPAP1-201ENST00000329468 7526 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
IFNA1P01562 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
IFNA1P01562 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
IFNA1P01562 ARID4A-206ENST00000431317 5783 ntTSL 5 BASIC11.65□□□□□ -0.54
IFNA1P01562 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC11.65□□□□□ -0.54
IFNA1P01562 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
IFNA1P01562 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
IFNA1P01562 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
IFNA1P01562 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
IFNA1P01562 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
IFNA1P01562 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
IFNA1P01562 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
IFNA1P01562 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.54
IFNA1P01562 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC11.65□□□□□ -0.54
IFNA1P01562 ZNF773-205ENST00000599847 5832 ntTSL 2 BASIC11.65□□□□□ -0.54
IFNA1P01562 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
IFNA1P01562 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
IFNA1P01562 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
IFNA1P01562 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
IFNA1P01562 HSPA8P5-201ENST00000456928 2069 ntBASIC11.65□□□□□ -0.54
IFNA1P01562 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
IFNA1P01562 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC11.65□□□□□ -0.54
IFNA1P01562 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
IFNA1P01562 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC11.65□□□□□ -0.54
IFNA1P01562 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC11.65□□□□□ -0.54
IFNA1P01562 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
IFNA1P01562 AC004066.1-201ENST00000502488 802 ntBASIC11.65□□□□□ -0.54
IFNA1P01562 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC11.65□□□□□ -0.54
IFNA1P01562 UNC93B6-202ENST00000528242 690 ntBASIC11.65□□□□□ -0.54
IFNA1P01562 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC11.65□□□□□ -0.54
IFNA1P01562 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
IFNA1P01562 NME3-204ENST00000563498 920 ntTSL 2 BASIC11.65□□□□□ -0.54
IFNA1P01562 AL049597.2-201ENST00000565575 961 ntBASIC11.65□□□□□ -0.54
IFNA1P01562 KRT18P8-201ENST00000581937 1246 ntBASIC11.65□□□□□ -0.54
IFNA1P01562 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC11.65□□□□□ -0.54
IFNA1P01562 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
IFNA1P01562 INO80C-210ENST00000590757 595 ntTSL 2 BASIC11.65□□□□□ -0.54
IFNA1P01562 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC11.65□□□□□ -0.54
IFNA1P01562 AC066615.1-201ENST00000640911 628 ntBASIC11.65□□□□□ -0.54
IFNA1P01562 PPIL2-201ENST00000335025 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
IFNA1P01562 TMEM94-201ENST00000314256 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
IFNA1P01562 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
IFNA1P01562 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
IFNA1P01562 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC11.65□□□□□ -0.54
IFNA1P01562 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
IFNA1P01562 AP3S2-216ENST00000617003 1561 ntBASIC11.65□□□□□ -0.54
IFNA1P01562 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC11.65□□□□□ -0.54
IFNA1P01562 HPD-204ENST00000543163 1709 ntTSL 5 BASIC11.65□□□□□ -0.54
IFNA1P01562 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
IFNA1P01562 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
IFNA1P01562 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC11.65□□□□□ -0.54
IFNA1P01562 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
IFNA1P01562 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC11.65□□□□□ -0.54
IFNA1P01562 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC11.65□□□□□ -0.55
IFNA1P01562 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.55
IFNA1P01562 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC11.65□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms