Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 SNORD3B-1-201ENST00000577988 758 ntBASIC14.49□□□□□ -0.09
PDGFBP01127 MIR4254-201ENST00000581063 76 ntBASIC14.49□□□□□ -0.09
PDGFBP01127 AC006116.2-201ENST00000589958 988 ntBASIC14.49□□□□□ -0.09
PDGFBP01127 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC14.49□□□□□ -0.09
PDGFBP01127 AC080013.5-201ENST00000607044 679 ntBASIC14.49□□□□□ -0.09
PDGFBP01127 GGNBP1-204ENST00000613113 887 ntBASIC14.49□□□□□ -0.09
PDGFBP01127 AC004466.2-201ENST00000614749 516 ntBASIC14.49□□□□□ -0.09
PDGFBP01127 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PDGFBP01127 AL365181.1-201ENST00000564032 1828 ntBASIC14.49□□□□□ -0.09
PDGFBP01127 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
PDGFBP01127 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PDGFBP01127 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDGFBP01127 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDGFBP01127 NKILA-202ENST00000614771 2598 ntBASIC14.49□□□□□ -0.09
PDGFBP01127 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDGFBP01127 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.49□□□□□ -0.09
PDGFBP01127 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC14.49□□□□□ -0.09
PDGFBP01127 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDGFBP01127 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDGFBP01127 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDGFBP01127 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDGFBP01127 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PDGFBP01127 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PDGFBP01127 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDGFBP01127 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDGFBP01127 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC14.49□□□□□ -0.09
PDGFBP01127 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDGFBP01127 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PDGFBP01127 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PDGFBP01127 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PDGFBP01127 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
PDGFBP01127 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
PDGFBP01127 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
PDGFBP01127 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
PDGFBP01127 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PDGFBP01127 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PDGFBP01127 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.48□□□□□ -0.09
PDGFBP01127 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.48□□□□□ -0.09
PDGFBP01127 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PDGFBP01127 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PDGFBP01127 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PDGFBP01127 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PDGFBP01127 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
PDGFBP01127 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PDGFBP01127 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
PDGFBP01127 AL157823.1-201ENST00000403727 628 ntBASIC14.48□□□□□ -0.09
PDGFBP01127 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC14.48□□□□□ -0.09
PDGFBP01127 RPL14-203ENST00000416518 812 ntTSL 3 BASIC14.48□□□□□ -0.09
PDGFBP01127 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC14.48□□□□□ -0.09
PDGFBP01127 AC136604.1-202ENST00000425471 771 ntBASIC14.48□□□□□ -0.09
PDGFBP01127 TXNL4B-203ENST00000426362 965 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
PDGFBP01127 EEF1DP5-201ENST00000431410 772 ntBASIC14.48□□□□□ -0.09
PDGFBP01127 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
PDGFBP01127 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
PDGFBP01127 AC092903.1-201ENST00000466506 262 ntBASIC14.48□□□□□ -0.09
PDGFBP01127 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC14.48□□□□□ -0.09
PDGFBP01127 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC14.48□□□□□ -0.09
PDGFBP01127 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC14.48□□□□□ -0.09
PDGFBP01127 BLOC1S5-205ENST00000543936 368 ntTSL 2 BASIC14.48□□□□□ -0.09
PDGFBP01127 KLF17P1-201ENST00000547105 1126 ntBASIC14.48□□□□□ -0.09
PDGFBP01127 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
PDGFBP01127 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC14.48□□□□□ -0.09
PDGFBP01127 AC104590.1-201ENST00000560813 648 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PDGFBP01127 AC145285.5-201ENST00000562217 361 ntBASIC14.48□□□□□ -0.09
PDGFBP01127 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC14.48□□□□□ -0.09
PDGFBP01127 RN7SL602P-201ENST00000578326 324 ntBASIC14.48□□□□□ -0.09
PDGFBP01127 RN7SL718P-201ENST00000581254 303 ntBASIC14.48□□□□□ -0.09
PDGFBP01127 PHF23-213ENST00000613632 850 ntTSL 5 BASIC14.48□□□□□ -0.09
PDGFBP01127 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PDGFBP01127 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
PDGFBP01127 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PDGFBP01127 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
PDGFBP01127 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PDGFBP01127 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PDGFBP01127 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
PDGFBP01127 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PDGFBP01127 AC139712.1-201ENST00000378256 1875 ntBASIC14.48□□□□□ -0.09
PDGFBP01127 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PDGFBP01127 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.48□□□□□ -0.09
PDGFBP01127 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
PDGFBP01127 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
PDGFBP01127 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC14.48□□□□□ -0.09
PDGFBP01127 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PDGFBP01127 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PDGFBP01127 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PDGFBP01127 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PDGFBP01127 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PDGFBP01127 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
PDGFBP01127 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PDGFBP01127 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PDGFBP01127 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PDGFBP01127 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PDGFBP01127 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC14.47□□□□□ -0.09
PDGFBP01127 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC14.47□□□□□ -0.09
PDGFBP01127 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
PDGFBP01127 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PDGFBP01127 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDGFBP01127 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDGFBP01127 LINC00528-201ENST00000600723 2160 ntBASIC14.47□□□□□ -0.09
PDGFBP01127 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms