Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MT-CO1P00395 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.09■□□□□ 0.01
MT-CO1P00395 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MT-CO1P00395 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MT-CO1P00395 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC15.09■□□□□ 0.01
MT-CO1P00395 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
MT-CO1P00395 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MT-CO1P00395 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MT-CO1P00395 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.09■□□□□ 0.01
MT-CO1P00395 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MT-CO1P00395 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MT-CO1P00395 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
MT-CO1P00395 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.08■□□□□ 0.01
MT-CO1P00395 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
MT-CO1P00395 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.08■□□□□ 0.01
MT-CO1P00395 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
MT-CO1P00395 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
MT-CO1P00395 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.08■□□□□ 0.01
MT-CO1P00395 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
MT-CO1P00395 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.08■□□□□ 0
MT-CO1P00395 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
MT-CO1P00395 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
MT-CO1P00395 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
MT-CO1P00395 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
MT-CO1P00395 AK6-201ENST00000380818 1183 ntTSL 2 BASIC15.08■□□□□ 0
MT-CO1P00395 MIR1247-201ENST00000408206 136 ntBASIC15.08■□□□□ 0
MT-CO1P00395 APOA2-204ENST00000464492 530 ntTSL 3 BASIC15.08■□□□□ 0
MT-CO1P00395 AC022494.1-201ENST00000466044 728 ntBASIC15.08■□□□□ 0
MT-CO1P00395 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC15.08■□□□□ 0
MT-CO1P00395 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC15.08■□□□□ 0
MT-CO1P00395 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC15.08■□□□□ 0
MT-CO1P00395 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
MT-CO1P00395 VPS18-202ENST00000558474 873 ntTSL 3 BASIC15.08■□□□□ 0
MT-CO1P00395 DUX4L46-201ENST00000566845 751 ntBASIC15.08■□□□□ 0
MT-CO1P00395 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC15.08■□□□□ 0
MT-CO1P00395 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC15.08■□□□□ 0
MT-CO1P00395 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC15.08■□□□□ 0
MT-CO1P00395 AC007663.3-201ENST00000609632 465 ntBASIC15.08■□□□□ 0
MT-CO1P00395 AC244093.1-201ENST00000610837 814 ntBASIC15.08■□□□□ 0
MT-CO1P00395 AL162426.1-201ENST00000624141 743 ntBASIC15.08■□□□□ 0
MT-CO1P00395 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
MT-CO1P00395 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
MT-CO1P00395 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC15.08■□□□□ 0
MT-CO1P00395 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
MT-CO1P00395 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
MT-CO1P00395 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
MT-CO1P00395 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC15.08■□□□□ 0
MT-CO1P00395 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC15.08■□□□□ 0
MT-CO1P00395 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.08■□□□□ 0
MT-CO1P00395 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
MT-CO1P00395 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC15.08■□□□□ 0
MT-CO1P00395 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC15.08■□□□□ 0
MT-CO1P00395 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC15.08■□□□□ 0
MT-CO1P00395 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.08■□□□□ 0
MT-CO1P00395 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
MT-CO1P00395 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.08■□□□□ 0
MT-CO1P00395 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC15.07■□□□□ 0
MT-CO1P00395 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC15.07■□□□□ 0
MT-CO1P00395 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
MT-CO1P00395 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
MT-CO1P00395 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
MT-CO1P00395 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.07■□□□□ 0
MT-CO1P00395 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
MT-CO1P00395 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
MT-CO1P00395 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.07■□□□□ 0
MT-CO1P00395 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
MT-CO1P00395 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC15.07■□□□□ 0
MT-CO1P00395 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
MT-CO1P00395 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
MT-CO1P00395 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
MT-CO1P00395 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
MT-CO1P00395 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
MT-CO1P00395 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC15.07■□□□□ 0
MT-CO1P00395 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC15.07■□□□□ 0
MT-CO1P00395 GPAA1P2-201ENST00000417923 928 ntBASIC15.07■□□□□ 0
MT-CO1P00395 PTPA-218ENST00000435132 618 ntTSL 2 BASIC15.07■□□□□ 0
MT-CO1P00395 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC15.07■□□□□ 0
MT-CO1P00395 ALG3P1-201ENST00000508806 1114 ntBASIC15.07■□□□□ 0
MT-CO1P00395 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC15.07■□□□□ 0
MT-CO1P00395 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC15.07■□□□□ 0
MT-CO1P00395 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC15.07■□□□□ 0
MT-CO1P00395 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC15.07■□□□□ 0
MT-CO1P00395 MIR3615-201ENST00000581999 87 ntBASIC15.07■□□□□ 0
MT-CO1P00395 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC15.07■□□□□ 0
MT-CO1P00395 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC15.07■□□□□ 0
MT-CO1P00395 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC15.07■□□□□ 0
MT-CO1P00395 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC15.07■□□□□ 0
MT-CO1P00395 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
MT-CO1P00395 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.07■□□□□ 0
MT-CO1P00395 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
MT-CO1P00395 MTHFR-210ENST00000641407 2387 ntBASIC15.07■□□□□ 0
MT-CO1P00395 GRN-222ENST00000639447 1314 ntTSL 2 BASIC15.07■□□□□ 0
MT-CO1P00395 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
MT-CO1P00395 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC15.07■□□□□ 0
MT-CO1P00395 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
MT-CO1P00395 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
MT-CO1P00395 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
MT-CO1P00395 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
MT-CO1P00395 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
MT-CO1P00395 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms