Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 R3HDM2P2-201ENST00000401880 2116 ntBASIC20.71■□□□□ 0.91
POLR1AO95602 EEF1DP5-201ENST00000431410 772 ntBASIC20.71■□□□□ 0.91
POLR1AO95602 AC010900.1-201ENST00000449849 1296 ntBASIC20.71■□□□□ 0.91
POLR1AO95602 RPS18P9-201ENST00000482817 460 ntBASIC20.71■□□□□ 0.91
POLR1AO95602 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC20.71■□□□□ 0.91
POLR1AO95602 ALG1L7P-201ENST00000502317 768 ntBASIC20.71■□□□□ 0.91
POLR1AO95602 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
POLR1AO95602 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
POLR1AO95602 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
POLR1AO95602 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC20.71■□□□□ 0.91
POLR1AO95602 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
POLR1AO95602 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
POLR1AO95602 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
POLR1AO95602 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
POLR1AO95602 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
POLR1AO95602 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
POLR1AO95602 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
POLR1AO95602 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
POLR1AO95602 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
POLR1AO95602 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC20.7■□□□□ 0.9
POLR1AO95602 AL160191.2-201ENST00000603975 601 ntBASIC20.7■□□□□ 0.9
POLR1AO95602 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC20.7■□□□□ 0.9
POLR1AO95602 AP002353.1-201ENST00000528257 1599 ntBASIC20.7■□□□□ 0.9
POLR1AO95602 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC20.7■□□□□ 0.9
POLR1AO95602 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
POLR1AO95602 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
POLR1AO95602 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
POLR1AO95602 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
POLR1AO95602 TKT-201ENST00000296289 1931 ntTSL 5 BASIC20.7■□□□□ 0.9
POLR1AO95602 HSPA7-201ENST00000445535 1927 ntBASIC20.7■□□□□ 0.9
POLR1AO95602 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
POLR1AO95602 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
POLR1AO95602 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC20.7■□□□□ 0.9
POLR1AO95602 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
POLR1AO95602 ODF3L1-201ENST00000332145 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
POLR1AO95602 HIST1H2APS2-201ENST00000454426 370 ntBASIC20.7■□□□□ 0.9
POLR1AO95602 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC20.7■□□□□ 0.9
POLR1AO95602 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC20.7■□□□□ 0.9
POLR1AO95602 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC20.7■□□□□ 0.9
POLR1AO95602 AC124068.2-201ENST00000569473 1109 ntBASIC20.7■□□□□ 0.9
POLR1AO95602 AP000769.1-203ENST00000637245 208 ntBASIC20.7■□□□□ 0.9
POLR1AO95602 MVK-217ENST00000639206 367 ntTSL 5 BASIC20.7■□□□□ 0.9
POLR1AO95602 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
POLR1AO95602 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC20.7■□□□□ 0.9
POLR1AO95602 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
POLR1AO95602 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
POLR1AO95602 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC20.69■□□□□ 0.9
POLR1AO95602 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
POLR1AO95602 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
POLR1AO95602 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
POLR1AO95602 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC20.69■□□□□ 0.9
POLR1AO95602 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
POLR1AO95602 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
POLR1AO95602 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
POLR1AO95602 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC20.69■□□□□ 0.9
POLR1AO95602 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
POLR1AO95602 PPP1R2P4-201ENST00000424051 595 ntBASIC20.69■□□□□ 0.9
POLR1AO95602 SOD2-205ENST00000444946 917 ntTSL 2 BASIC20.69■□□□□ 0.9
POLR1AO95602 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
POLR1AO95602 KNOP1P1-201ENST00000542108 989 ntBASIC20.69■□□□□ 0.9
POLR1AO95602 FOXN3-AS2-201ENST00000554071 1262 ntBASIC20.69■□□□□ 0.9
POLR1AO95602 EMC4-208ENST00000559078 599 ntTSL 3 BASIC20.69■□□□□ 0.9
POLR1AO95602 GOLGA2P7-209ENST00000560408 745 ntBASIC20.69■□□□□ 0.9
POLR1AO95602 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC20.69■□□□□ 0.9
POLR1AO95602 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC20.69■□□□□ 0.9
POLR1AO95602 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC20.69■□□□□ 0.9
POLR1AO95602 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
POLR1AO95602 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
POLR1AO95602 COCH-203ENST00000460581 2688 ntTSL 2 BASIC20.69■□□□□ 0.9
POLR1AO95602 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
POLR1AO95602 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
POLR1AO95602 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
POLR1AO95602 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
POLR1AO95602 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
POLR1AO95602 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC20.68■□□□□ 0.9
POLR1AO95602 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
POLR1AO95602 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
POLR1AO95602 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
POLR1AO95602 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
POLR1AO95602 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
POLR1AO95602 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
POLR1AO95602 RNVU1-8-201ENST00000364272 125 ntBASIC20.68■□□□□ 0.9
POLR1AO95602 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
POLR1AO95602 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
POLR1AO95602 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC20.68■□□□□ 0.9
POLR1AO95602 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC20.68■□□□□ 0.9
POLR1AO95602 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
POLR1AO95602 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
POLR1AO95602 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
POLR1AO95602 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC20.68■□□□□ 0.9
POLR1AO95602 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
POLR1AO95602 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
POLR1AO95602 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC20.68■□□□□ 0.9
POLR1AO95602 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
POLR1AO95602 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
POLR1AO95602 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
POLR1AO95602 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC20.68■□□□□ 0.9
POLR1AO95602 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC20.67■□□□□ 0.9
POLR1AO95602 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC20.67■□□□□ 0.9
POLR1AO95602 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms