Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MBD4O95243 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC17.42■□□□□ 0.38
MBD4O95243 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MBD4O95243 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MBD4O95243 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC17.42■□□□□ 0.38
MBD4O95243 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
MBD4O95243 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC17.42■□□□□ 0.38
MBD4O95243 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MBD4O95243 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
MBD4O95243 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MBD4O95243 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MBD4O95243 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC17.42■□□□□ 0.38
MBD4O95243 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
MBD4O95243 AL008707.1-201ENST00000422498 534 ntBASIC17.42■□□□□ 0.38
MBD4O95243 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC17.42■□□□□ 0.38
MBD4O95243 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC17.42■□□□□ 0.38
MBD4O95243 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC17.42■□□□□ 0.38
MBD4O95243 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC17.42■□□□□ 0.38
MBD4O95243 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC17.42■□□□□ 0.38
MBD4O95243 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
MBD4O95243 PGAM1P5-201ENST00000548011 764 ntBASIC17.42■□□□□ 0.38
MBD4O95243 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC17.42■□□□□ 0.38
MBD4O95243 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MBD4O95243 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MBD4O95243 NAP1L6-202ENST00000641404 1222 ntBASIC17.42■□□□□ 0.38
MBD4O95243 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC17.42■□□□□ 0.38
MBD4O95243 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC17.42■□□□□ 0.38
MBD4O95243 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MBD4O95243 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MBD4O95243 KRT8P21-201ENST00000430398 1491 ntBASIC17.42■□□□□ 0.38
MBD4O95243 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MBD4O95243 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC17.42■□□□□ 0.38
MBD4O95243 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MBD4O95243 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MBD4O95243 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MBD4O95243 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
MBD4O95243 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MBD4O95243 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MBD4O95243 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MBD4O95243 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MBD4O95243 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MBD4O95243 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MBD4O95243 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MBD4O95243 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MBD4O95243 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
MBD4O95243 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MBD4O95243 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
MBD4O95243 SLC25A24P2-201ENST00000415059 510 ntBASIC17.41■□□□□ 0.38
MBD4O95243 AL596276.2-201ENST00000447525 331 ntBASIC17.41■□□□□ 0.38
MBD4O95243 RERG-205ENST00000537647 935 ntTSL 2 BASIC17.41■□□□□ 0.38
MBD4O95243 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
MBD4O95243 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC17.41■□□□□ 0.38
MBD4O95243 AC124068.2-201ENST00000569473 1109 ntBASIC17.41■□□□□ 0.38
MBD4O95243 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC17.41■□□□□ 0.38
MBD4O95243 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC17.41■□□□□ 0.38
MBD4O95243 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC17.41■□□□□ 0.38
MBD4O95243 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC17.41■□□□□ 0.38
MBD4O95243 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
MBD4O95243 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MBD4O95243 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC17.41■□□□□ 0.38
MBD4O95243 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MBD4O95243 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC17.41■□□□□ 0.38
MBD4O95243 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC17.41■□□□□ 0.38
MBD4O95243 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC17.41■□□□□ 0.38
MBD4O95243 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
MBD4O95243 USP28-214ENST00000545540 3431 ntTSL 2 BASIC17.41■□□□□ 0.38
MBD4O95243 MPI-203ENST00000535694 1523 ntTSL 2 BASIC17.41■□□□□ 0.38
MBD4O95243 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MBD4O95243 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MBD4O95243 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MBD4O95243 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC17.41■□□□□ 0.38
MBD4O95243 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MBD4O95243 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC17.4■□□□□ 0.38
MBD4O95243 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
MBD4O95243 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MBD4O95243 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MBD4O95243 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MBD4O95243 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC17.4■□□□□ 0.38
MBD4O95243 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
MBD4O95243 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC17.4■□□□□ 0.38
MBD4O95243 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MBD4O95243 ISCA2P1-201ENST00000425548 448 ntBASIC17.4■□□□□ 0.38
MBD4O95243 AC024681.1-201ENST00000521917 487 ntBASIC17.4■□□□□ 0.38
MBD4O95243 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC17.4■□□□□ 0.38
MBD4O95243 AC005586.2-201ENST00000563946 837 ntBASIC17.4■□□□□ 0.38
MBD4O95243 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC17.4■□□□□ 0.38
MBD4O95243 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC17.4■□□□□ 0.38
MBD4O95243 AC138627.1-207ENST00000641560 1006 ntBASIC17.4■□□□□ 0.38
MBD4O95243 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MBD4O95243 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MBD4O95243 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MBD4O95243 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MBD4O95243 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC17.4■□□□□ 0.38
MBD4O95243 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC17.4■□□□□ 0.38
MBD4O95243 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
MBD4O95243 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
MBD4O95243 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
MBD4O95243 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
MBD4O95243 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
MBD4O95243 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms