Protein–RNA interactions for Protein: O75340

PDCD6, Programmed cell death protein 6, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6O75340 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
PDCD6O75340 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
PDCD6O75340 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PDCD6O75340 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
PDCD6O75340 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PDCD6O75340 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PDCD6O75340 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
PDCD6O75340 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
PDCD6O75340 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC12.43□□□□□ -0.42
PDCD6O75340 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC12.43□□□□□ -0.42
PDCD6O75340 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
PDCD6O75340 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
PDCD6O75340 SERBP1P5-201ENST00000510079 1181 ntBASIC12.43□□□□□ -0.42
PDCD6O75340 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC12.43□□□□□ -0.42
PDCD6O75340 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC12.43□□□□□ -0.42
PDCD6O75340 AC004233.3-201ENST00000607794 1269 ntBASIC12.43□□□□□ -0.42
PDCD6O75340 BX088702.1-201ENST00000610784 235 ntBASIC12.43□□□□□ -0.42
PDCD6O75340 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PDCD6O75340 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC12.43□□□□□ -0.42
PDCD6O75340 AC090643.2-201ENST00000623442 2029 ntBASIC12.43□□□□□ -0.42
PDCD6O75340 DDC-213ENST00000617822 1809 ntTSL 3 BASIC12.43□□□□□ -0.42
PDCD6O75340 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
PDCD6O75340 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC12.43□□□□□ -0.42
PDCD6O75340 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC12.43□□□□□ -0.42
PDCD6O75340 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC12.43□□□□□ -0.42
PDCD6O75340 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PDCD6O75340 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
PDCD6O75340 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
PDCD6O75340 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PDCD6O75340 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PDCD6O75340 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
PDCD6O75340 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
PDCD6O75340 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PDCD6O75340 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
PDCD6O75340 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
PDCD6O75340 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
PDCD6O75340 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC12.42□□□□□ -0.42
PDCD6O75340 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC12.42□□□□□ -0.42
PDCD6O75340 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
PDCD6O75340 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC12.42□□□□□ -0.42
PDCD6O75340 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PDCD6O75340 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
PDCD6O75340 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
PDCD6O75340 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
PDCD6O75340 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PDCD6O75340 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
PDCD6O75340 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
PDCD6O75340 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC12.42□□□□□ -0.42
PDCD6O75340 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
PDCD6O75340 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
PDCD6O75340 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
PDCD6O75340 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC12.42□□□□□ -0.42
PDCD6O75340 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
PDCD6O75340 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC12.42□□□□□ -0.42
PDCD6O75340 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC12.42□□□□□ -0.42
PDCD6O75340 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
PDCD6O75340 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
PDCD6O75340 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PDCD6O75340 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
PDCD6O75340 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PDCD6O75340 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC12.42□□□□□ -0.42
PDCD6O75340 F10-203ENST00000409306 1450 ntTSL 3 BASIC12.42□□□□□ -0.42
PDCD6O75340 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC12.42□□□□□ -0.42
PDCD6O75340 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
PDCD6O75340 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
PDCD6O75340 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
PDCD6O75340 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
PDCD6O75340 AC130686.1-201ENST00000622936 2466 ntBASIC12.42□□□□□ -0.42
PDCD6O75340 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PDCD6O75340 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PDCD6O75340 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PDCD6O75340 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PDCD6O75340 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
PDCD6O75340 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
PDCD6O75340 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC12.42□□□□□ -0.42
PDCD6O75340 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
PDCD6O75340 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PDCD6O75340 RAC2-204ENST00000406508 893 ntTSL 5 BASIC12.42□□□□□ -0.42
PDCD6O75340 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
PDCD6O75340 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
PDCD6O75340 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
PDCD6O75340 AC093433.1-201ENST00000458048 571 ntBASIC12.42□□□□□ -0.42
PDCD6O75340 ELK1P1-201ENST00000485699 580 ntBASIC12.42□□□□□ -0.42
PDCD6O75340 ALG3P1-201ENST00000508806 1114 ntBASIC12.42□□□□□ -0.42
PDCD6O75340 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC12.42□□□□□ -0.42
PDCD6O75340 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PDCD6O75340 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
PDCD6O75340 WDR88-203ENST00000592765 651 ntTSL 5 BASIC12.42□□□□□ -0.42
PDCD6O75340 CHCHD2P3-201ENST00000603038 451 ntBASIC12.42□□□□□ -0.42
PDCD6O75340 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PDCD6O75340 AC138466.3-201ENST00000619983 221 ntBASIC12.42□□□□□ -0.42
PDCD6O75340 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
PDCD6O75340 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC12.42□□□□□ -0.42
PDCD6O75340 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC12.42□□□□□ -0.42
PDCD6O75340 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PDCD6O75340 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PDCD6O75340 AL590440.2-201ENST00000641973 1595 ntBASIC12.42□□□□□ -0.42
PDCD6O75340 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PDCD6O75340 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
PDCD6O75340 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms