Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 KLK3-211ENST00000597483 810 ntTSL 2 BASIC13.82□□□□□ -0.2
LDB3O75112 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC13.82□□□□□ -0.2
LDB3O75112 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LDB3O75112 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LDB3O75112 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LDB3O75112 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LDB3O75112 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
LDB3O75112 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
LDB3O75112 TUBB1P2-201ENST00000422712 1306 ntBASIC13.82□□□□□ -0.2
LDB3O75112 TUBB1P1-201ENST00000503144 1300 ntBASIC13.82□□□□□ -0.2
LDB3O75112 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
LDB3O75112 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
LDB3O75112 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
LDB3O75112 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LDB3O75112 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LDB3O75112 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
LDB3O75112 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC13.82□□□□□ -0.2
LDB3O75112 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC13.82□□□□□ -0.2
LDB3O75112 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.82□□□□□ -0.2
LDB3O75112 AC005089.1-201ENST00000619486 2241 ntBASIC13.82□□□□□ -0.2
LDB3O75112 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LDB3O75112 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LDB3O75112 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LDB3O75112 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.82□□□□□ -0.2
LDB3O75112 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.81□□□□□ -0.2
LDB3O75112 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LDB3O75112 AC015802.1-201ENST00000588104 1449 ntBASIC13.81□□□□□ -0.2
LDB3O75112 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LDB3O75112 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.81□□□□□ -0.2
LDB3O75112 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.81□□□□□ -0.2
LDB3O75112 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC13.81□□□□□ -0.2
LDB3O75112 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.81□□□□□ -0.2
LDB3O75112 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LDB3O75112 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
LDB3O75112 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LDB3O75112 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LDB3O75112 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.81□□□□□ -0.2
LDB3O75112 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LDB3O75112 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LDB3O75112 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LDB3O75112 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.81□□□□□ -0.2
LDB3O75112 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
LDB3O75112 SBF1P1-201ENST00000444527 5631 ntBASIC13.81□□□□□ -0.2
LDB3O75112 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
LDB3O75112 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LDB3O75112 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LDB3O75112 APOC3-202ENST00000375345 604 ntTSL 5 BASIC13.81□□□□□ -0.2
LDB3O75112 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC13.81□□□□□ -0.2
LDB3O75112 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC13.81□□□□□ -0.2
LDB3O75112 HSPB1P2-201ENST00000448722 546 ntBASIC13.81□□□□□ -0.2
LDB3O75112 AL035414.1-201ENST00000451327 857 ntBASIC13.81□□□□□ -0.2
LDB3O75112 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LDB3O75112 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC13.81□□□□□ -0.2
LDB3O75112 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LDB3O75112 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC13.81□□□□□ -0.2
LDB3O75112 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
LDB3O75112 AC009955.4-201ENST00000597192 544 ntBASIC13.81□□□□□ -0.2
LDB3O75112 AL096828.3-201ENST00000615354 462 ntBASIC13.81□□□□□ -0.2
LDB3O75112 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
LDB3O75112 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
LDB3O75112 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.81□□□□□ -0.2
LDB3O75112 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LDB3O75112 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
LDB3O75112 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
LDB3O75112 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LDB3O75112 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LDB3O75112 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LDB3O75112 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LDB3O75112 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.81□□□□□ -0.2
LDB3O75112 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC13.81□□□□□ -0.2
LDB3O75112 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
LDB3O75112 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LDB3O75112 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
LDB3O75112 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LDB3O75112 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LDB3O75112 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
LDB3O75112 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LDB3O75112 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LDB3O75112 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.8□□□□□ -0.2
LDB3O75112 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LDB3O75112 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LDB3O75112 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
LDB3O75112 AC244394.1-201ENST00000435000 1665 ntBASIC13.8□□□□□ -0.2
LDB3O75112 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LDB3O75112 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LDB3O75112 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LDB3O75112 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LDB3O75112 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LDB3O75112 RPF1-202ENST00000370656 724 ntTSL 2 BASIC13.8□□□□□ -0.2
LDB3O75112 RBM38-204ENST00000371219 760 ntTSL 2 BASIC13.8□□□□□ -0.2
LDB3O75112 BRWD1P1-201ENST00000401091 371 ntBASIC13.8□□□□□ -0.2
LDB3O75112 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC13.8□□□□□ -0.2
LDB3O75112 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LDB3O75112 AL354877.1-201ENST00000424412 413 ntBASIC13.8□□□□□ -0.2
LDB3O75112 AC244107.1-201ENST00000442033 332 ntBASIC13.8□□□□□ -0.2
LDB3O75112 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC13.8□□□□□ -0.2
LDB3O75112 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC13.8□□□□□ -0.2
LDB3O75112 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LDB3O75112 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC13.8□□□□□ -0.2
LDB3O75112 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms