Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
PAX4O43316 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
PAX4O43316 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
PAX4O43316 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
PAX4O43316 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
PAX4O43316 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
PAX4O43316 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC10.61□□□□□ -0.71
PAX4O43316 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
PAX4O43316 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
PAX4O43316 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
PAX4O43316 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC10.61□□□□□ -0.71
PAX4O43316 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
PAX4O43316 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC10.61□□□□□ -0.71
PAX4O43316 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC10.61□□□□□ -0.71
PAX4O43316 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC10.61□□□□□ -0.71
PAX4O43316 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC10.61□□□□□ -0.71
PAX4O43316 AC108718.1-201ENST00000482382 554 ntTSL 4 BASIC10.61□□□□□ -0.71
PAX4O43316 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
PAX4O43316 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
PAX4O43316 SLC25A47P1-201ENST00000531577 414 ntBASIC10.61□□□□□ -0.71
PAX4O43316 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC10.61□□□□□ -0.71
PAX4O43316 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
PAX4O43316 AC005225.4-201ENST00000557330 545 ntBASIC10.61□□□□□ -0.71
PAX4O43316 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC10.61□□□□□ -0.71
PAX4O43316 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
PAX4O43316 AC132938.2-201ENST00000579188 680 ntBASIC10.61□□□□□ -0.71
PAX4O43316 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC10.61□□□□□ -0.71
PAX4O43316 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC10.61□□□□□ -0.71
PAX4O43316 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC10.61□□□□□ -0.71
PAX4O43316 AL022328.1-201ENST00000610050 478 ntBASIC10.61□□□□□ -0.71
PAX4O43316 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC10.61□□□□□ -0.71
PAX4O43316 AC145423.3-201ENST00000615987 467 ntBASIC10.61□□□□□ -0.71
PAX4O43316 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
PAX4O43316 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC10.61□□□□□ -0.71
PAX4O43316 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
PAX4O43316 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC10.61□□□□□ -0.71
PAX4O43316 AL591163.1-201ENST00000641757 987 ntBASIC10.61□□□□□ -0.71
PAX4O43316 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC10.61□□□□□ -0.71
PAX4O43316 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
PAX4O43316 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC10.61□□□□□ -0.71
PAX4O43316 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
PAX4O43316 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
PAX4O43316 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC10.61□□□□□ -0.71
PAX4O43316 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC10.61□□□□□ -0.71
PAX4O43316 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC10.61□□□□□ -0.71
PAX4O43316 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
PAX4O43316 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
PAX4O43316 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC10.61□□□□□ -0.71
PAX4O43316 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
PAX4O43316 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
PAX4O43316 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC10.61□□□□□ -0.71
PAX4O43316 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
PAX4O43316 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC10.61□□□□□ -0.71
PAX4O43316 PID1-202ENST00000392054 2745 ntTSL 2 BASIC10.61□□□□□ -0.71
PAX4O43316 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
PAX4O43316 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
PAX4O43316 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC10.61□□□□□ -0.71
PAX4O43316 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC10.61□□□□□ -0.71
PAX4O43316 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
PAX4O43316 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
PAX4O43316 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
PAX4O43316 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
PAX4O43316 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
PAX4O43316 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
PAX4O43316 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
PAX4O43316 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC10.6□□□□□ -0.71
PAX4O43316 EPB41L5-205ENST00000452780 6410 ntTSL 5 BASIC10.6□□□□□ -0.71
PAX4O43316 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
PAX4O43316 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC10.6□□□□□ -0.71
PAX4O43316 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
PAX4O43316 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
PAX4O43316 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
PAX4O43316 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC10.6□□□□□ -0.71
PAX4O43316 GLI3-201ENST00000395925 8208 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
PAX4O43316 TP73-203ENST00000357733 4899 ntTSL 5 BASIC10.6□□□□□ -0.71
PAX4O43316 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
PAX4O43316 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
PAX4O43316 FOS-202ENST00000535987 1402 ntTSL 2 BASIC10.6□□□□□ -0.71
PAX4O43316 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
PAX4O43316 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC10.6□□□□□ -0.71
PAX4O43316 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC10.6□□□□□ -0.71
PAX4O43316 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC10.6□□□□□ -0.71
PAX4O43316 CICP4-201ENST00000447359 2812 ntBASIC10.6□□□□□ -0.71
PAX4O43316 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
PAX4O43316 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
PAX4O43316 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
PAX4O43316 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
PAX4O43316 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC10.6□□□□□ -0.71
PAX4O43316 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC10.6□□□□□ -0.71
PAX4O43316 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
PAX4O43316 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
PAX4O43316 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC10.6□□□□□ -0.71
PAX4O43316 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
PAX4O43316 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
PAX4O43316 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC10.6□□□□□ -0.71
PAX4O43316 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC10.6□□□□□ -0.71
PAX4O43316 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
PAX4O43316 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
PAX4O43316 GRAP-202ENST00000395635 834 ntTSL 2 BASIC10.6□□□□□ -0.71
PAX4O43316 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC10.6□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms