Protein–RNA interactions for Protein: O14727

APAF1, Apoptotic protease-activating factor 1, humanhuman

Predictions only

Length 1,248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1O14727 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC19.23■□□□□ 0.67
APAF1O14727 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
APAF1O14727 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC19.23■□□□□ 0.67
APAF1O14727 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
APAF1O14727 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
APAF1O14727 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC19.23■□□□□ 0.67
APAF1O14727 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC19.23■□□□□ 0.67
APAF1O14727 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
APAF1O14727 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC19.23■□□□□ 0.67
APAF1O14727 AC064801.2-201ENST00000625052 1303 ntBASIC19.23■□□□□ 0.67
APAF1O14727 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
APAF1O14727 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
APAF1O14727 AC004899.1-201ENST00000424687 1714 ntBASIC19.22■□□□□ 0.67
APAF1O14727 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
APAF1O14727 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC19.22■□□□□ 0.67
APAF1O14727 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC19.22■□□□□ 0.67
APAF1O14727 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC19.22■□□□□ 0.67
APAF1O14727 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
APAF1O14727 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
APAF1O14727 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC19.22■□□□□ 0.67
APAF1O14727 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC19.22■□□□□ 0.67
APAF1O14727 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC19.22■□□□□ 0.67
APAF1O14727 RPS3-201ENST00000278572 907 ntTSL 3 BASIC19.22■□□□□ 0.67
APAF1O14727 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
APAF1O14727 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
APAF1O14727 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC19.22■□□□□ 0.67
APAF1O14727 FAM58BP-201ENST00000439056 645 ntBASIC19.22■□□□□ 0.67
APAF1O14727 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC19.22■□□□□ 0.67
APAF1O14727 AC006122.1-201ENST00000493323 440 ntBASIC19.22■□□□□ 0.67
APAF1O14727 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC19.22■□□□□ 0.67
APAF1O14727 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC19.22■□□□□ 0.67
APAF1O14727 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
APAF1O14727 AC005586.2-201ENST00000563946 837 ntBASIC19.22■□□□□ 0.67
APAF1O14727 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC19.22■□□□□ 0.67
APAF1O14727 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
APAF1O14727 MIR4538-201ENST00000581377 78 ntBASIC19.22■□□□□ 0.67
APAF1O14727 AC009884.2-201ENST00000603110 324 ntBASIC19.22■□□□□ 0.67
APAF1O14727 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC19.22■□□□□ 0.67
APAF1O14727 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
APAF1O14727 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
APAF1O14727 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
APAF1O14727 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC19.22■□□□□ 0.67
APAF1O14727 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC19.22■□□□□ 0.67
APAF1O14727 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
APAF1O14727 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
APAF1O14727 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
APAF1O14727 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
APAF1O14727 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
APAF1O14727 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
APAF1O14727 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
APAF1O14727 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
APAF1O14727 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
APAF1O14727 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
APAF1O14727 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
APAF1O14727 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
APAF1O14727 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
APAF1O14727 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
APAF1O14727 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
APAF1O14727 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
APAF1O14727 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
APAF1O14727 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
APAF1O14727 FAM86MP-201ENST00000340703 885 ntBASIC19.21■□□□□ 0.67
APAF1O14727 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
APAF1O14727 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC19.21■□□□□ 0.67
APAF1O14727 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
APAF1O14727 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
APAF1O14727 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
APAF1O14727 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
APAF1O14727 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC19.21■□□□□ 0.67
APAF1O14727 ST13P19-201ENST00000442505 1124 ntBASIC19.21■□□□□ 0.67
APAF1O14727 AC104073.2-201ENST00000453737 312 ntBASIC19.21■□□□□ 0.67
APAF1O14727 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC19.21■□□□□ 0.67
APAF1O14727 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC19.21■□□□□ 0.67
APAF1O14727 TUBB8P8-201ENST00000458717 1058 ntBASIC19.21■□□□□ 0.67
APAF1O14727 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC19.21■□□□□ 0.67
APAF1O14727 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC19.21■□□□□ 0.67
APAF1O14727 AC104506.1-201ENST00000609247 429 ntBASIC19.21■□□□□ 0.67
APAF1O14727 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC19.21■□□□□ 0.67
APAF1O14727 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC19.21■□□□□ 0.67
APAF1O14727 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC19.21■□□□□ 0.67
APAF1O14727 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
APAF1O14727 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
APAF1O14727 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC19.21■□□□□ 0.66
APAF1O14727 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
APAF1O14727 FAM90A7P-201ENST00000382628 1395 ntBASIC19.2■□□□□ 0.66
APAF1O14727 FAM90A23P-201ENST00000400136 1395 ntBASIC19.2■□□□□ 0.66
APAF1O14727 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
APAF1O14727 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
APAF1O14727 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC19.2■□□□□ 0.66
APAF1O14727 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
APAF1O14727 OS9-204ENST00000389146 2091 ntTSL 2 BASIC19.2■□□□□ 0.66
APAF1O14727 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
APAF1O14727 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
APAF1O14727 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
APAF1O14727 APOA2-204ENST00000464492 530 ntTSL 3 BASIC19.2■□□□□ 0.66
APAF1O14727 ATP6V0CP2-201ENST00000469409 207 ntBASIC19.2■□□□□ 0.66
APAF1O14727 HLA-J-204ENST00000495278 958 ntBASIC19.2■□□□□ 0.66
APAF1O14727 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
APAF1O14727 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
APAF1O14727 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms