Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CUX2O14529 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
CUX2O14529 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC24.27■■□□□ 1.48
CUX2O14529 OR2W3-201ENST00000360358 945 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
CUX2O14529 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC24.27■■□□□ 1.48
CUX2O14529 IGHV3-11-201ENST00000390601 473 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
CUX2O14529 Metazoa_SRP.8-201ENST00000398067 251 ntBASIC24.27■■□□□ 1.48
CUX2O14529 ABCD1P4-201ENST00000399687 604 ntBASIC24.27■■□□□ 1.48
CUX2O14529 KRTAP10-12-201ENST00000400365 873 ntAPPRIS P2 BASIC24.27■■□□□ 1.48
CUX2O14529 AC139143.1-201ENST00000441772 1207 ntBASIC24.27■■□□□ 1.48
CUX2O14529 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
CUX2O14529 AL110503.1-201ENST00000457224 534 ntTSL 3 BASIC24.27■■□□□ 1.48
CUX2O14529 AC090152.1-202ENST00000518993 1079 ntTSL 3 BASIC24.27■■□□□ 1.48
CUX2O14529 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
CUX2O14529 AC002985.1-201ENST00000596918 685 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
CUX2O14529 LUC7L3-223ENST00000625349 408 ntTSL 2 BASIC24.27■■□□□ 1.48
CUX2O14529 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CUX2O14529 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CUX2O14529 API5-203ENST00000455725 2257 ntTSL 2 BASIC24.27■■□□□ 1.48
CUX2O14529 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CUX2O14529 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CUX2O14529 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
CUX2O14529 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
CUX2O14529 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
CUX2O14529 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CUX2O14529 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
CUX2O14529 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CUX2O14529 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CUX2O14529 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CUX2O14529 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CUX2O14529 KCNK15-AS1-203ENST00000427598 862 ntTSL 2 BASIC24.26■■□□□ 1.47
CUX2O14529 AC103563.1-201ENST00000429316 123 ntBASIC24.26■■□□□ 1.47
CUX2O14529 GAS5-209ENST00000430245 723 ntTSL 3 BASIC24.26■■□□□ 1.47
CUX2O14529 PSME2P2-201ENST00000453033 700 ntBASIC24.26■■□□□ 1.47
CUX2O14529 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC24.26■■□□□ 1.47
CUX2O14529 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC24.26■■□□□ 1.47
CUX2O14529 AL136298.3-201ENST00000556746 445 ntBASIC24.26■■□□□ 1.47
CUX2O14529 FAM223B-202ENST00000598177 713 ntBASIC24.26■■□□□ 1.47
CUX2O14529 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CUX2O14529 FAM223A-202ENST00000625204 713 ntBASIC24.26■■□□□ 1.47
CUX2O14529 COG6-212ENST00000630730 186 ntTSL 5 BASIC24.26■■□□□ 1.47
CUX2O14529 ZSCAN21-203ENST00000456748 1904 ntTSL 5 BASIC24.26■■□□□ 1.47
CUX2O14529 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
CUX2O14529 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
CUX2O14529 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
CUX2O14529 AC117503.4-201ENST00000623229 1418 ntBASIC24.26■■□□□ 1.47
CUX2O14529 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
CUX2O14529 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC24.26■■□□□ 1.47
CUX2O14529 WNT8A-202ENST00000398754 1498 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CUX2O14529 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
CUX2O14529 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC24.26■■□□□ 1.47
CUX2O14529 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC24.26■■□□□ 1.47
CUX2O14529 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC24.26■■□□□ 1.47
CUX2O14529 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CUX2O14529 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC24.26■■□□□ 1.47
CUX2O14529 LINC01101-201ENST00000622953 1884 ntBASIC24.26■■□□□ 1.47
CUX2O14529 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
CUX2O14529 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
CUX2O14529 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
CUX2O14529 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
CUX2O14529 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC24.26■■□□□ 1.47
CUX2O14529 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
CUX2O14529 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
CUX2O14529 AL158207.2-201ENST00000414926 266 ntTSL 5 BASIC24.26■■□□□ 1.47
CUX2O14529 AC092573.1-201ENST00000433054 884 ntBASIC24.26■■□□□ 1.47
CUX2O14529 AL137078.1-201ENST00000446280 404 ntTSL 2 BASIC24.26■■□□□ 1.47
CUX2O14529 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
CUX2O14529 BAK1P2-201ENST00000532665 631 ntBASIC24.26■■□□□ 1.47
CUX2O14529 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
CUX2O14529 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
CUX2O14529 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC24.25■■□□□ 1.47
CUX2O14529 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CUX2O14529 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC24.25■■□□□ 1.47
CUX2O14529 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
CUX2O14529 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
CUX2O14529 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CUX2O14529 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
CUX2O14529 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CUX2O14529 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
CUX2O14529 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC24.25■■□□□ 1.47
CUX2O14529 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CUX2O14529 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
CUX2O14529 CD8B-202ENST00000349455 849 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
CUX2O14529 MRPL55-209ENST00000366735 1212 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CUX2O14529 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
CUX2O14529 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
CUX2O14529 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
CUX2O14529 SNHG14-201ENST00000414175 610 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
CUX2O14529 AC090696.1-201ENST00000419100 418 ntTSL 3 BASIC24.25■■□□□ 1.47
CUX2O14529 AC069257.3-201ENST00000431391 708 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
CUX2O14529 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC24.25■■□□□ 1.47
CUX2O14529 DUX4L31-201ENST00000446466 1136 ntBASIC24.25■■□□□ 1.47
CUX2O14529 AC091132.6-201ENST00000586411 826 ntTSL 5 BASIC24.25■■□□□ 1.47
CUX2O14529 SSR4P1-203ENST00000599569 2260 ntBASIC24.25■■□□□ 1.47
CUX2O14529 AL591471.1-201ENST00000621855 229 ntBASIC24.25■■□□□ 1.47
CUX2O14529 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC24.25■■□□□ 1.47
CUX2O14529 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CUX2O14529 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
CUX2O14529 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
CUX2O14529 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms