Protein–RNA interactions for Protein: B2RNN3

C1QTNF9B, Complement C1q and tumor necrosis factor-related protein 9B, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF9BB2RNN3 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC13.63□□□□□ -0.23
C1QTNF9BB2RNN3 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC13.63□□□□□ -0.23
C1QTNF9BB2RNN3 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
C1QTNF9BB2RNN3 ZBED1P1-201ENST00000502364 1930 ntBASIC13.63□□□□□ -0.23
C1QTNF9BB2RNN3 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC13.63□□□□□ -0.23
C1QTNF9BB2RNN3 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
C1QTNF9BB2RNN3 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.63□□□□□ -0.23
C1QTNF9BB2RNN3 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
C1QTNF9BB2RNN3 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
C1QTNF9BB2RNN3 CSHL1-201ENST00000259003 739 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
C1QTNF9BB2RNN3 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
C1QTNF9BB2RNN3 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
C1QTNF9BB2RNN3 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
C1QTNF9BB2RNN3 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC13.63□□□□□ -0.23
C1QTNF9BB2RNN3 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
C1QTNF9BB2RNN3 HNRNPA1P27-201ENST00000412087 955 ntBASIC13.63□□□□□ -0.23
C1QTNF9BB2RNN3 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC13.63□□□□□ -0.23
C1QTNF9BB2RNN3 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
C1QTNF9BB2RNN3 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC13.63□□□□□ -0.23
C1QTNF9BB2RNN3 CSHL1-206ENST00000450719 973 ntTSL 2 BASIC13.63□□□□□ -0.23
C1QTNF9BB2RNN3 AC103923.1-201ENST00000453229 1228 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
C1QTNF9BB2RNN3 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC13.63□□□□□ -0.23
C1QTNF9BB2RNN3 PGAP2-207ENST00000463452 931 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
C1QTNF9BB2RNN3 AC108724.1-201ENST00000481669 352 ntBASIC13.63□□□□□ -0.23
C1QTNF9BB2RNN3 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC13.63□□□□□ -0.23
C1QTNF9BB2RNN3 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
C1QTNF9BB2RNN3 LINC01551-203ENST00000550266 455 ntTSL 3 BASIC13.63□□□□□ -0.23
C1QTNF9BB2RNN3 RN7SL665P-201ENST00000578793 300 ntBASIC13.63□□□□□ -0.23
C1QTNF9BB2RNN3 AC006116.2-201ENST00000589958 988 ntBASIC13.63□□□□□ -0.23
C1QTNF9BB2RNN3 LINC01398-202ENST00000634819 1292 ntTSL 5 BASIC13.63□□□□□ -0.23
C1QTNF9BB2RNN3 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC13.63□□□□□ -0.23
C1QTNF9BB2RNN3 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.63□□□□□ -0.23
C1QTNF9BB2RNN3 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC13.63□□□□□ -0.23
C1QTNF9BB2RNN3 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
C1QTNF9BB2RNN3 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC13.63□□□□□ -0.23
C1QTNF9BB2RNN3 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
C1QTNF9BB2RNN3 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
C1QTNF9BB2RNN3 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
C1QTNF9BB2RNN3 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
C1QTNF9BB2RNN3 ACE-203ENST00000413513 2237 ntTSL 2 BASIC13.63□□□□□ -0.23
C1QTNF9BB2RNN3 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
C1QTNF9BB2RNN3 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.63□□□□□ -0.23
C1QTNF9BB2RNN3 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.63□□□□□ -0.23
C1QTNF9BB2RNN3 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
C1QTNF9BB2RNN3 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
C1QTNF9BB2RNN3 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
C1QTNF9BB2RNN3 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
C1QTNF9BB2RNN3 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
C1QTNF9BB2RNN3 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
C1QTNF9BB2RNN3 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
C1QTNF9BB2RNN3 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
C1QTNF9BB2RNN3 AC105917.1-201ENST00000506637 2539 ntBASIC13.62□□□□□ -0.23
C1QTNF9BB2RNN3 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
C1QTNF9BB2RNN3 AC127383.1-201ENST00000444697 1800 ntBASIC13.62□□□□□ -0.23
C1QTNF9BB2RNN3 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
C1QTNF9BB2RNN3 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
C1QTNF9BB2RNN3 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC13.62□□□□□ -0.23
C1QTNF9BB2RNN3 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC13.62□□□□□ -0.23
C1QTNF9BB2RNN3 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
C1QTNF9BB2RNN3 FKBP4P8-201ENST00000610931 1369 ntBASIC13.62□□□□□ -0.23
C1QTNF9BB2RNN3 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
C1QTNF9BB2RNN3 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
C1QTNF9BB2RNN3 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC13.62□□□□□ -0.23
C1QTNF9BB2RNN3 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC13.62□□□□□ -0.23
C1QTNF9BB2RNN3 SAT1-201ENST00000379251 801 ntTSL 2 BASIC13.62□□□□□ -0.23
C1QTNF9BB2RNN3 SAT1-202ENST00000379253 909 ntTSL 2 BASIC13.62□□□□□ -0.23
C1QTNF9BB2RNN3 SAT1-203ENST00000379254 868 ntTSL 3 BASIC13.62□□□□□ -0.23
C1QTNF9BB2RNN3 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
C1QTNF9BB2RNN3 GEMIN8P4-201ENST00000380526 729 ntBASIC13.62□□□□□ -0.23
C1QTNF9BB2RNN3 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
C1QTNF9BB2RNN3 TOMM5-203ENST00000401811 789 ntTSL 2 BASIC13.62□□□□□ -0.23
C1QTNF9BB2RNN3 AL157823.1-201ENST00000403727 628 ntBASIC13.62□□□□□ -0.23
C1QTNF9BB2RNN3 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC13.62□□□□□ -0.23
C1QTNF9BB2RNN3 PGAM1P11-201ENST00000416729 680 ntBASIC13.62□□□□□ -0.23
C1QTNF9BB2RNN3 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC13.62□□□□□ -0.23
C1QTNF9BB2RNN3 ASS1P2-201ENST00000439895 1223 ntBASIC13.62□□□□□ -0.23
C1QTNF9BB2RNN3 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC13.62□□□□□ -0.23
C1QTNF9BB2RNN3 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC13.62□□□□□ -0.23
C1QTNF9BB2RNN3 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC13.62□□□□□ -0.23
C1QTNF9BB2RNN3 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC13.62□□□□□ -0.23
C1QTNF9BB2RNN3 AAMDC-207ENST00000527134 693 ntTSL 3 BASIC13.62□□□□□ -0.23
C1QTNF9BB2RNN3 FOXN3-AS2-201ENST00000554071 1262 ntBASIC13.62□□□□□ -0.23
C1QTNF9BB2RNN3 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC13.62□□□□□ -0.23
C1QTNF9BB2RNN3 SRP14-208ENST00000560773 468 ntTSL 3 BASIC13.62□□□□□ -0.23
C1QTNF9BB2RNN3 INO80E-209ENST00000567254 625 ntTSL 2 BASIC13.62□□□□□ -0.23
C1QTNF9BB2RNN3 AC004231.3-201ENST00000579136 258 ntTSL 3 BASIC13.62□□□□□ -0.23
C1QTNF9BB2RNN3 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
C1QTNF9BB2RNN3 CBR3-AS1-206ENST00000608632 659 ntTSL 5 BASIC13.62□□□□□ -0.23
C1QTNF9BB2RNN3 MIR6893-201ENST00000613458 69 ntBASIC13.62□□□□□ -0.23
C1QTNF9BB2RNN3 OAZ3-207ENST00000627780 850 ntTSL 5 BASIC13.62□□□□□ -0.23
C1QTNF9BB2RNN3 OAZ3-209ENST00000635322 745 ntTSL 5 BASIC13.62□□□□□ -0.23
C1QTNF9BB2RNN3 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
C1QTNF9BB2RNN3 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
C1QTNF9BB2RNN3 MAD2L1BP-202ENST00000451025 1517 ntTSL 2 BASIC13.62□□□□□ -0.23
C1QTNF9BB2RNN3 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
C1QTNF9BB2RNN3 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
C1QTNF9BB2RNN3 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
C1QTNF9BB2RNN3 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC13.62□□□□□ -0.23
C1QTNF9BB2RNN3 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
C1QTNF9BB2RNN3 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms