Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TBC1D3FA6NER0 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TBC1D3FA6NER0 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
TBC1D3FA6NER0 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.58□□□□□ -0.08
TBC1D3FA6NER0 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
TBC1D3FA6NER0 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TBC1D3FA6NER0 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
TBC1D3FA6NER0 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TBC1D3FA6NER0 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.58□□□□□ -0.08
TBC1D3FA6NER0 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TBC1D3FA6NER0 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC14.58□□□□□ -0.08
TBC1D3FA6NER0 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC14.58□□□□□ -0.08
TBC1D3FA6NER0 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC14.58□□□□□ -0.08
TBC1D3FA6NER0 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TBC1D3FA6NER0 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC14.58□□□□□ -0.08
TBC1D3FA6NER0 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC14.58□□□□□ -0.08
TBC1D3FA6NER0 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC14.58□□□□□ -0.08
TBC1D3FA6NER0 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC14.58□□□□□ -0.08
TBC1D3FA6NER0 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC14.58□□□□□ -0.08
TBC1D3FA6NER0 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TBC1D3FA6NER0 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC14.58□□□□□ -0.08
TBC1D3FA6NER0 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC14.58□□□□□ -0.08
TBC1D3FA6NER0 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC14.58□□□□□ -0.08
TBC1D3FA6NER0 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC14.58□□□□□ -0.08
TBC1D3FA6NER0 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.58□□□□□ -0.08
TBC1D3FA6NER0 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TBC1D3FA6NER0 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TBC1D3FA6NER0 AL590440.2-201ENST00000641973 1595 ntBASIC14.58□□□□□ -0.08
TBC1D3FA6NER0 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TBC1D3FA6NER0 AHCYP4-201ENST00000419201 1315 ntBASIC14.58□□□□□ -0.08
TBC1D3FA6NER0 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.58□□□□□ -0.08
TBC1D3FA6NER0 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
TBC1D3FA6NER0 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
TBC1D3FA6NER0 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TBC1D3FA6NER0 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TBC1D3FA6NER0 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TBC1D3FA6NER0 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TBC1D3FA6NER0 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.58□□□□□ -0.08
TBC1D3FA6NER0 AC018442.1-201ENST00000421439 2061 ntBASIC14.57□□□□□ -0.08
TBC1D3FA6NER0 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TBC1D3FA6NER0 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TBC1D3FA6NER0 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TBC1D3FA6NER0 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TBC1D3FA6NER0 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TBC1D3FA6NER0 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TBC1D3FA6NER0 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TBC1D3FA6NER0 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
TBC1D3FA6NER0 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TBC1D3FA6NER0 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
TBC1D3FA6NER0 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TBC1D3FA6NER0 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TBC1D3FA6NER0 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TBC1D3FA6NER0 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TBC1D3FA6NER0 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.57□□□□□ -0.08
TBC1D3FA6NER0 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TBC1D3FA6NER0 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TBC1D3FA6NER0 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TBC1D3FA6NER0 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TBC1D3FA6NER0 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TBC1D3FA6NER0 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TBC1D3FA6NER0 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC14.57□□□□□ -0.08
TBC1D3FA6NER0 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TBC1D3FA6NER0 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC14.57□□□□□ -0.08
TBC1D3FA6NER0 CEP164P1-201ENST00000455142 418 ntBASIC14.57□□□□□ -0.08
TBC1D3FA6NER0 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC14.57□□□□□ -0.08
TBC1D3FA6NER0 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC14.57□□□□□ -0.08
TBC1D3FA6NER0 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC14.57□□□□□ -0.08
TBC1D3FA6NER0 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
TBC1D3FA6NER0 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TBC1D3FA6NER0 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC14.57□□□□□ -0.08
TBC1D3FA6NER0 MIR4754-201ENST00000582477 89 ntBASIC14.57□□□□□ -0.08
TBC1D3FA6NER0 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
TBC1D3FA6NER0 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
TBC1D3FA6NER0 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TBC1D3FA6NER0 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC14.57□□□□□ -0.08
TBC1D3FA6NER0 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC14.57□□□□□ -0.08
TBC1D3FA6NER0 AC128714.1-201ENST00000637035 887 ntBASIC14.57□□□□□ -0.08
TBC1D3FA6NER0 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
TBC1D3FA6NER0 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.57□□□□□ -0.08
TBC1D3FA6NER0 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
TBC1D3FA6NER0 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TBC1D3FA6NER0 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
TBC1D3FA6NER0 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TBC1D3FA6NER0 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TBC1D3FA6NER0 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TBC1D3FA6NER0 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
TBC1D3FA6NER0 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
TBC1D3FA6NER0 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TBC1D3FA6NER0 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TBC1D3FA6NER0 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.56□□□□□ -0.08
TBC1D3FA6NER0 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TBC1D3FA6NER0 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TBC1D3FA6NER0 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
TBC1D3FA6NER0 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.56□□□□□ -0.08
TBC1D3FA6NER0 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TBC1D3FA6NER0 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TBC1D3FA6NER0 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
TBC1D3FA6NER0 TCAF2P1-201ENST00000291129 2421 ntBASIC14.56□□□□□ -0.08
TBC1D3FA6NER0 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
TBC1D3FA6NER0 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 395.8 ms