Protein–RNA interactions for Protein: A6NEF3

GOLGA6L4, Golgin subfamily A member 6-like protein 4, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GOLGA6L4A6NEF3 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GOLGA6L4A6NEF3 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
GOLGA6L4A6NEF3 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
GOLGA6L4A6NEF3 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GOLGA6L4A6NEF3 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
GOLGA6L4A6NEF3 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
GOLGA6L4A6NEF3 AC107918.4-201ENST00000641966 3141 ntBASIC17.04■□□□□ 0.32
GOLGA6L4A6NEF3 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
GOLGA6L4A6NEF3 WARS-203ENST00000358655 2466 ntTSL 2 BASIC17.04■□□□□ 0.32
GOLGA6L4A6NEF3 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GOLGA6L4A6NEF3 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GOLGA6L4A6NEF3 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GOLGA6L4A6NEF3 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
GOLGA6L4A6NEF3 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GOLGA6L4A6NEF3 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GOLGA6L4A6NEF3 TLE1P1-201ENST00000422965 589 ntBASIC17.04■□□□□ 0.32
GOLGA6L4A6NEF3 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC17.04■□□□□ 0.32
GOLGA6L4A6NEF3 AL512638.1-201ENST00000457493 794 ntBASIC17.04■□□□□ 0.32
GOLGA6L4A6NEF3 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GOLGA6L4A6NEF3 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC17.04■□□□□ 0.32
GOLGA6L4A6NEF3 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC17.04■□□□□ 0.32
GOLGA6L4A6NEF3 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.04■□□□□ 0.32
GOLGA6L4A6NEF3 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GOLGA6L4A6NEF3 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.04■□□□□ 0.32
GOLGA6L4A6NEF3 AC104794.3-201ENST00000566840 1248 ntBASIC17.04■□□□□ 0.32
GOLGA6L4A6NEF3 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC17.04■□□□□ 0.32
GOLGA6L4A6NEF3 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.04■□□□□ 0.32
GOLGA6L4A6NEF3 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17.04■□□□□ 0.32
GOLGA6L4A6NEF3 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC17.04■□□□□ 0.32
GOLGA6L4A6NEF3 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GOLGA6L4A6NEF3 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
GOLGA6L4A6NEF3 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GOLGA6L4A6NEF3 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
GOLGA6L4A6NEF3 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC17.04■□□□□ 0.32
GOLGA6L4A6NEF3 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GOLGA6L4A6NEF3 AC011840.2-201ENST00000563063 1520 ntBASIC17.04■□□□□ 0.32
GOLGA6L4A6NEF3 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
GOLGA6L4A6NEF3 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
GOLGA6L4A6NEF3 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
GOLGA6L4A6NEF3 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
GOLGA6L4A6NEF3 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GOLGA6L4A6NEF3 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
GOLGA6L4A6NEF3 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GOLGA6L4A6NEF3 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC17.04■□□□□ 0.32
GOLGA6L4A6NEF3 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
GOLGA6L4A6NEF3 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
GOLGA6L4A6NEF3 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GOLGA6L4A6NEF3 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
GOLGA6L4A6NEF3 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
GOLGA6L4A6NEF3 AC130686.1-201ENST00000622936 2466 ntBASIC17.04■□□□□ 0.32
GOLGA6L4A6NEF3 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC17.04■□□□□ 0.32
GOLGA6L4A6NEF3 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
GOLGA6L4A6NEF3 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GOLGA6L4A6NEF3 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GOLGA6L4A6NEF3 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC17.03■□□□□ 0.32
GOLGA6L4A6NEF3 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
GOLGA6L4A6NEF3 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GOLGA6L4A6NEF3 INTS4P2-202ENST00000614726 2019 ntBASIC17.03■□□□□ 0.32
GOLGA6L4A6NEF3 GSN-209ENST00000449733 2702 ntTSL 2 BASIC17.03■□□□□ 0.32
GOLGA6L4A6NEF3 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
GOLGA6L4A6NEF3 LRRC59-203ENST00000576448 1531 ntBASIC17.03■□□□□ 0.32
GOLGA6L4A6NEF3 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GOLGA6L4A6NEF3 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC17.03■□□□□ 0.32
GOLGA6L4A6NEF3 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.03■□□□□ 0.32
GOLGA6L4A6NEF3 LSM5-207ENST00000410044 687 ntTSL 3 BASIC17.03■□□□□ 0.32
GOLGA6L4A6NEF3 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.03■□□□□ 0.32
GOLGA6L4A6NEF3 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC17.03■□□□□ 0.32
GOLGA6L4A6NEF3 MEP1AP4-201ENST00000423244 1087 ntBASIC17.03■□□□□ 0.32
GOLGA6L4A6NEF3 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
GOLGA6L4A6NEF3 AC104596.2-201ENST00000512793 793 ntBASIC17.03■□□□□ 0.32
GOLGA6L4A6NEF3 DOC2GP-202ENST00000514950 1163 ntBASIC17.03■□□□□ 0.32
GOLGA6L4A6NEF3 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
GOLGA6L4A6NEF3 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC17.03■□□□□ 0.32
GOLGA6L4A6NEF3 AC023310.3-201ENST00000557027 670 ntBASIC17.03■□□□□ 0.32
GOLGA6L4A6NEF3 AC100756.1-201ENST00000562736 682 ntBASIC17.03■□□□□ 0.32
GOLGA6L4A6NEF3 AC138749.3-201ENST00000567691 622 ntBASIC17.03■□□□□ 0.32
GOLGA6L4A6NEF3 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC17.03■□□□□ 0.32
GOLGA6L4A6NEF3 SPDYE22P-201ENST00000582158 798 ntBASIC17.03■□□□□ 0.32
GOLGA6L4A6NEF3 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC17.03■□□□□ 0.32
GOLGA6L4A6NEF3 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC17.03■□□□□ 0.32
GOLGA6L4A6NEF3 AC116165.1-201ENST00000611806 668 ntBASIC17.03■□□□□ 0.32
GOLGA6L4A6NEF3 AL603764.1-201ENST00000636452 321 ntBASIC17.03■□□□□ 0.32
GOLGA6L4A6NEF3 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
GOLGA6L4A6NEF3 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GOLGA6L4A6NEF3 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
GOLGA6L4A6NEF3 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GOLGA6L4A6NEF3 CICP17-201ENST00000418553 2377 ntBASIC17.03■□□□□ 0.32
GOLGA6L4A6NEF3 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GOLGA6L4A6NEF3 MAPT-IT1-201ENST00000624111 3016 ntBASIC17.03■□□□□ 0.32
GOLGA6L4A6NEF3 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GOLGA6L4A6NEF3 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC17.03■□□□□ 0.32
GOLGA6L4A6NEF3 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GOLGA6L4A6NEF3 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GOLGA6L4A6NEF3 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
GOLGA6L4A6NEF3 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
GOLGA6L4A6NEF3 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
GOLGA6L4A6NEF3 AC015688.4-201ENST00000580780 1647 ntBASIC17.03■□□□□ 0.32
GOLGA6L4A6NEF3 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC17.03■□□□□ 0.32
GOLGA6L4A6NEF3 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
GOLGA6L4A6NEF3 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms