Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC66A2RUB6 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.03■□□□□ 0.16
CCDC66A2RUB6 AC004066.1-201ENST00000502488 802 ntBASIC16.03■□□□□ 0.16
CCDC66A2RUB6 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.03■□□□□ 0.16
CCDC66A2RUB6 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.03■□□□□ 0.16
CCDC66A2RUB6 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC16.03■□□□□ 0.16
CCDC66A2RUB6 AC015911.4-201ENST00000588022 1070 ntBASIC16.03■□□□□ 0.16
CCDC66A2RUB6 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.03■□□□□ 0.16
CCDC66A2RUB6 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CCDC66A2RUB6 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
CCDC66A2RUB6 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CCDC66A2RUB6 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC66A2RUB6 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC66A2RUB6 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CCDC66A2RUB6 TRIM80P-201ENST00000455685 2848 ntBASIC16.03■□□□□ 0.16
CCDC66A2RUB6 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC66A2RUB6 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC66A2RUB6 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCDC66A2RUB6 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCDC66A2RUB6 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CCDC66A2RUB6 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCDC66A2RUB6 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CCDC66A2RUB6 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
CCDC66A2RUB6 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCDC66A2RUB6 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCDC66A2RUB6 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CCDC66A2RUB6 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
CCDC66A2RUB6 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCDC66A2RUB6 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCDC66A2RUB6 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.02■□□□□ 0.16
CCDC66A2RUB6 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CCDC66A2RUB6 AL360270.3-201ENST00000609118 1348 ntBASIC16.02■□□□□ 0.16
CCDC66A2RUB6 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
CCDC66A2RUB6 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CCDC66A2RUB6 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
CCDC66A2RUB6 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CCDC66A2RUB6 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CCDC66A2RUB6 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CCDC66A2RUB6 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCDC66A2RUB6 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.02■□□□□ 0.16
CCDC66A2RUB6 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.02■□□□□ 0.16
CCDC66A2RUB6 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC16.02■□□□□ 0.16
CCDC66A2RUB6 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.02■□□□□ 0.16
CCDC66A2RUB6 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CCDC66A2RUB6 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.02■□□□□ 0.16
CCDC66A2RUB6 AC027369.6-201ENST00000525520 931 ntBASIC16.02■□□□□ 0.16
CCDC66A2RUB6 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.02■□□□□ 0.16
CCDC66A2RUB6 TIMM17BP1-201ENST00000545713 516 ntBASIC16.02■□□□□ 0.16
CCDC66A2RUB6 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CCDC66A2RUB6 AC044860.1-202ENST00000559481 777 ntBASIC16.02■□□□□ 0.16
CCDC66A2RUB6 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.02■□□□□ 0.16
CCDC66A2RUB6 AC023090.2-201ENST00000625182 2110 ntBASIC16.02■□□□□ 0.16
CCDC66A2RUB6 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16.02■□□□□ 0.16
CCDC66A2RUB6 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CCDC66A2RUB6 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CCDC66A2RUB6 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.15
CCDC66A2RUB6 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC16.02■□□□□ 0.15
CCDC66A2RUB6 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
CCDC66A2RUB6 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CCDC66A2RUB6 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
CCDC66A2RUB6 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
CCDC66A2RUB6 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
CCDC66A2RUB6 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CCDC66A2RUB6 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC16.02■□□□□ 0.15
CCDC66A2RUB6 AC015802.1-201ENST00000588104 1449 ntBASIC16.02■□□□□ 0.15
CCDC66A2RUB6 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
CCDC66A2RUB6 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CCDC66A2RUB6 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC66A2RUB6 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC66A2RUB6 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CCDC66A2RUB6 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CCDC66A2RUB6 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC66A2RUB6 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC66A2RUB6 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC66A2RUB6 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC66A2RUB6 KRT18P28-201ENST00000453838 1332 ntBASIC16.01■□□□□ 0.15
CCDC66A2RUB6 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.01■□□□□ 0.15
CCDC66A2RUB6 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC16.01■□□□□ 0.15
CCDC66A2RUB6 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC66A2RUB6 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC66A2RUB6 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC66A2RUB6 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC66A2RUB6 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.01■□□□□ 0.15
CCDC66A2RUB6 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC66A2RUB6 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.01■□□□□ 0.15
CCDC66A2RUB6 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.01■□□□□ 0.15
CCDC66A2RUB6 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC66A2RUB6 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.01■□□□□ 0.15
CCDC66A2RUB6 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.01■□□□□ 0.15
CCDC66A2RUB6 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CCDC66A2RUB6 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.01■□□□□ 0.15
CCDC66A2RUB6 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.01■□□□□ 0.15
CCDC66A2RUB6 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CCDC66A2RUB6 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.01■□□□□ 0.15
CCDC66A2RUB6 AC025678.2-201ENST00000562061 970 ntBASIC16.01■□□□□ 0.15
CCDC66A2RUB6 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.01■□□□□ 0.15
CCDC66A2RUB6 AC004449.1-201ENST00000564240 433 ntBASIC16.01■□□□□ 0.15
CCDC66A2RUB6 AC140878.1-201ENST00000565277 250 ntBASIC16.01■□□□□ 0.15
CCDC66A2RUB6 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.01■□□□□ 0.15
CCDC66A2RUB6 AC092337.1-201ENST00000568699 1129 ntBASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms