Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC18.29■□□□□ 0.52
LOC102724428A0A0B4J2F2 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC18.29■□□□□ 0.52
LOC102724428A0A0B4J2F2 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC18.29■□□□□ 0.52
LOC102724428A0A0B4J2F2 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
LOC102724428A0A0B4J2F2 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
LOC102724428A0A0B4J2F2 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LOC102724428A0A0B4J2F2 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LOC102724428A0A0B4J2F2 PPT1-215ENST00000641471 2368 ntBASIC18.28■□□□□ 0.52
LOC102724428A0A0B4J2F2 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
LOC102724428A0A0B4J2F2 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
LOC102724428A0A0B4J2F2 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC18.28■□□□□ 0.52
LOC102724428A0A0B4J2F2 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LOC102724428A0A0B4J2F2 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC18.28■□□□□ 0.52
LOC102724428A0A0B4J2F2 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LOC102724428A0A0B4J2F2 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LOC102724428A0A0B4J2F2 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LOC102724428A0A0B4J2F2 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC18.28■□□□□ 0.52
LOC102724428A0A0B4J2F2 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LOC102724428A0A0B4J2F2 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC18.28■□□□□ 0.52
LOC102724428A0A0B4J2F2 OR52M2P-201ENST00000414298 959 ntBASIC18.28■□□□□ 0.52
LOC102724428A0A0B4J2F2 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC18.28■□□□□ 0.52
LOC102724428A0A0B4J2F2 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC18.28■□□□□ 0.52
LOC102724428A0A0B4J2F2 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC18.28■□□□□ 0.52
LOC102724428A0A0B4J2F2 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LOC102724428A0A0B4J2F2 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LOC102724428A0A0B4J2F2 VENTXP3-201ENST00000546480 773 ntBASIC18.28■□□□□ 0.52
LOC102724428A0A0B4J2F2 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC18.28■□□□□ 0.52
LOC102724428A0A0B4J2F2 ABHD17AP9-201ENST00000561925 548 ntBASIC18.28■□□□□ 0.52
LOC102724428A0A0B4J2F2 COX5A-205ENST00000568517 582 ntTSL 3 BASIC18.28■□□□□ 0.52
LOC102724428A0A0B4J2F2 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC18.28■□□□□ 0.52
LOC102724428A0A0B4J2F2 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LOC102724428A0A0B4J2F2 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC18.28■□□□□ 0.52
LOC102724428A0A0B4J2F2 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LOC102724428A0A0B4J2F2 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC18.28■□□□□ 0.52
LOC102724428A0A0B4J2F2 KRT8P18-201ENST00000413425 1445 ntBASIC18.28■□□□□ 0.52
LOC102724428A0A0B4J2F2 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LOC102724428A0A0B4J2F2 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LOC102724428A0A0B4J2F2 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LOC102724428A0A0B4J2F2 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LOC102724428A0A0B4J2F2 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LOC102724428A0A0B4J2F2 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC18.28■□□□□ 0.52
LOC102724428A0A0B4J2F2 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC18.28■□□□□ 0.52
LOC102724428A0A0B4J2F2 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
LOC102724428A0A0B4J2F2 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
LOC102724428A0A0B4J2F2 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
LOC102724428A0A0B4J2F2 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
LOC102724428A0A0B4J2F2 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC18.27■□□□□ 0.52
LOC102724428A0A0B4J2F2 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC18.27■□□□□ 0.52
LOC102724428A0A0B4J2F2 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC18.27■□□□□ 0.52
LOC102724428A0A0B4J2F2 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.52
LOC102724428A0A0B4J2F2 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LOC102724428A0A0B4J2F2 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
LOC102724428A0A0B4J2F2 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LOC102724428A0A0B4J2F2 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
LOC102724428A0A0B4J2F2 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LOC102724428A0A0B4J2F2 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LOC102724428A0A0B4J2F2 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LOC102724428A0A0B4J2F2 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC18.27■□□□□ 0.52
LOC102724428A0A0B4J2F2 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC18.27■□□□□ 0.52
LOC102724428A0A0B4J2F2 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC18.27■□□□□ 0.52
LOC102724428A0A0B4J2F2 BPIFB5P-201ENST00000457066 1099 ntBASIC18.27■□□□□ 0.52
LOC102724428A0A0B4J2F2 CISD2-202ENST00000503643 808 ntTSL 2 BASIC18.27■□□□□ 0.52
LOC102724428A0A0B4J2F2 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC18.27■□□□□ 0.52
LOC102724428A0A0B4J2F2 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC18.27■□□□□ 0.52
LOC102724428A0A0B4J2F2 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
LOC102724428A0A0B4J2F2 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LOC102724428A0A0B4J2F2 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LOC102724428A0A0B4J2F2 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LOC102724428A0A0B4J2F2 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC18.27■□□□□ 0.52
LOC102724428A0A0B4J2F2 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LOC102724428A0A0B4J2F2 SRP14-204ENST00000558720 780 ntTSL 2 BASIC18.27■□□□□ 0.52
LOC102724428A0A0B4J2F2 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC18.27■□□□□ 0.52
LOC102724428A0A0B4J2F2 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LOC102724428A0A0B4J2F2 PAUPAR-201ENST00000630360 2965 ntBASIC18.27■□□□□ 0.52
LOC102724428A0A0B4J2F2 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LOC102724428A0A0B4J2F2 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LOC102724428A0A0B4J2F2 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LOC102724428A0A0B4J2F2 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC18.27■□□□□ 0.52
LOC102724428A0A0B4J2F2 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC18.27■□□□□ 0.51
LOC102724428A0A0B4J2F2 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
LOC102724428A0A0B4J2F2 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
LOC102724428A0A0B4J2F2 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC18.27■□□□□ 0.51
LOC102724428A0A0B4J2F2 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
LOC102724428A0A0B4J2F2 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
LOC102724428A0A0B4J2F2 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
LOC102724428A0A0B4J2F2 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
LOC102724428A0A0B4J2F2 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
LOC102724428A0A0B4J2F2 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LOC102724428A0A0B4J2F2 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LOC102724428A0A0B4J2F2 AL109954.1-202ENST00000564051 2148 ntBASIC18.26■□□□□ 0.51
LOC102724428A0A0B4J2F2 LINC00115-201ENST00000473798 1317 ntBASIC18.26■□□□□ 0.51
LOC102724428A0A0B4J2F2 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
LOC102724428A0A0B4J2F2 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
LOC102724428A0A0B4J2F2 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
LOC102724428A0A0B4J2F2 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LOC102724428A0A0B4J2F2 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC18.26■□□□□ 0.51
LOC102724428A0A0B4J2F2 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LOC102724428A0A0B4J2F2 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC18.26■□□□□ 0.51
LOC102724428A0A0B4J2F2 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LOC102724428A0A0B4J2F2 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms