Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDC42BPBQ9Y5S2 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CDC42BPBQ9Y5S2 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDC42BPBQ9Y5S2 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
CDC42BPBQ9Y5S2 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC21.38■■□□□ 1.01
CDC42BPBQ9Y5S2 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
CDC42BPBQ9Y5S2 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CDC42BPBQ9Y5S2 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC21.38■■□□□ 1.01
CDC42BPBQ9Y5S2 GOLGA2P8-201ENST00000505201 779 ntBASIC21.38■■□□□ 1.01
CDC42BPBQ9Y5S2 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CDC42BPBQ9Y5S2 MT3-202ENST00000561640 514 ntTSL 3 BASIC21.38■■□□□ 1.01
CDC42BPBQ9Y5S2 AL590235.1-201ENST00000564650 861 ntBASIC21.38■■□□□ 1.01
CDC42BPBQ9Y5S2 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CDC42BPBQ9Y5S2 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDC42BPBQ9Y5S2 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC21.38■■□□□ 1.01
CDC42BPBQ9Y5S2 URAHP-205ENST00000610227 398 ntBASIC21.38■■□□□ 1.01
CDC42BPBQ9Y5S2 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC21.38■■□□□ 1.01
CDC42BPBQ9Y5S2 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC21.38■■□□□ 1.01
CDC42BPBQ9Y5S2 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CDC42BPBQ9Y5S2 AC105917.1-201ENST00000506637 2539 ntBASIC21.37■■□□□ 1.01
CDC42BPBQ9Y5S2 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CDC42BPBQ9Y5S2 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC21.37■■□□□ 1.01
CDC42BPBQ9Y5S2 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDC42BPBQ9Y5S2 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDC42BPBQ9Y5S2 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC21.37■■□□□ 1.01
CDC42BPBQ9Y5S2 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC21.37■■□□□ 1.01
CDC42BPBQ9Y5S2 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CDC42BPBQ9Y5S2 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDC42BPBQ9Y5S2 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CDC42BPBQ9Y5S2 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDC42BPBQ9Y5S2 USP17L6P-201ENST00000382470 1197 ntBASIC21.37■■□□□ 1.01
CDC42BPBQ9Y5S2 AL157823.1-201ENST00000403727 628 ntBASIC21.37■■□□□ 1.01
CDC42BPBQ9Y5S2 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC21.37■■□□□ 1.01
CDC42BPBQ9Y5S2 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC21.37■■□□□ 1.01
CDC42BPBQ9Y5S2 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC21.37■■□□□ 1.01
CDC42BPBQ9Y5S2 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC21.37■■□□□ 1.01
CDC42BPBQ9Y5S2 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDC42BPBQ9Y5S2 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC21.37■■□□□ 1.01
CDC42BPBQ9Y5S2 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDC42BPBQ9Y5S2 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
CDC42BPBQ9Y5S2 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDC42BPBQ9Y5S2 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDC42BPBQ9Y5S2 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CDC42BPBQ9Y5S2 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC21.36■■□□□ 1.01
CDC42BPBQ9Y5S2 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC21.36■■□□□ 1.01
CDC42BPBQ9Y5S2 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC21.36■■□□□ 1.01
CDC42BPBQ9Y5S2 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC21.36■■□□□ 1.01
CDC42BPBQ9Y5S2 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC21.36■■□□□ 1.01
CDC42BPBQ9Y5S2 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC21.36■■□□□ 1.01
CDC42BPBQ9Y5S2 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDC42BPBQ9Y5S2 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CDC42BPBQ9Y5S2 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC21.36■■□□□ 1.01
CDC42BPBQ9Y5S2 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDC42BPBQ9Y5S2 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDC42BPBQ9Y5S2 PES1P2-201ENST00000449745 1735 ntBASIC21.36■■□□□ 1.01
CDC42BPBQ9Y5S2 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
CDC42BPBQ9Y5S2 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC21.36■■□□□ 1.01
CDC42BPBQ9Y5S2 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
CDC42BPBQ9Y5S2 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC21.36■■□□□ 1.01
CDC42BPBQ9Y5S2 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC21.36■■□□□ 1.01
CDC42BPBQ9Y5S2 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC21.36■■□□□ 1.01
CDC42BPBQ9Y5S2 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC21.36■■□□□ 1.01
CDC42BPBQ9Y5S2 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC21.36■■□□□ 1.01
CDC42BPBQ9Y5S2 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CDC42BPBQ9Y5S2 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDC42BPBQ9Y5S2 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDC42BPBQ9Y5S2 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC21.36■■□□□ 1.01
CDC42BPBQ9Y5S2 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDC42BPBQ9Y5S2 AL022313.4-201ENST00000562756 2046 ntBASIC21.36■■□□□ 1.01
CDC42BPBQ9Y5S2 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CDC42BPBQ9Y5S2 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC21.35■■□□□ 1.01
CDC42BPBQ9Y5S2 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDC42BPBQ9Y5S2 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC21.35■■□□□ 1.01
CDC42BPBQ9Y5S2 GGTLC4P-201ENST00000402176 664 ntBASIC21.35■■□□□ 1.01
CDC42BPBQ9Y5S2 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CDC42BPBQ9Y5S2 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CDC42BPBQ9Y5S2 VDAC1P11-201ENST00000458323 852 ntBASIC21.35■■□□□ 1.01
CDC42BPBQ9Y5S2 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
CDC42BPBQ9Y5S2 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDC42BPBQ9Y5S2 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDC42BPBQ9Y5S2 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC21.35■■□□□ 1.01
CDC42BPBQ9Y5S2 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CDC42BPBQ9Y5S2 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CDC42BPBQ9Y5S2 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDC42BPBQ9Y5S2 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
CDC42BPBQ9Y5S2 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDC42BPBQ9Y5S2 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC21.35■■□□□ 1.01
CDC42BPBQ9Y5S2 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDC42BPBQ9Y5S2 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC21.35■■□□□ 1.01
CDC42BPBQ9Y5S2 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CDC42BPBQ9Y5S2 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC21.35■■□□□ 1.01
CDC42BPBQ9Y5S2 RNA5SP491-201ENST00000362936 118 ntBASIC21.35■■□□□ 1.01
CDC42BPBQ9Y5S2 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDC42BPBQ9Y5S2 NQO2-204ENST00000380454 851 ntTSL 2 BASIC21.35■■□□□ 1.01
CDC42BPBQ9Y5S2 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDC42BPBQ9Y5S2 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
CDC42BPBQ9Y5S2 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
CDC42BPBQ9Y5S2 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC21.35■■□□□ 1.01
CDC42BPBQ9Y5S2 SOD2-205ENST00000444946 917 ntTSL 2 BASIC21.35■■□□□ 1.01
CDC42BPBQ9Y5S2 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms