Protein–RNA interactions for Protein: Q9Y2E6

DTX4, E3 ubiquitin-protein ligase DTX4, humanhuman

Predictions only

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX4Q9Y2E6 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
DTX4Q9Y2E6 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC13.59□□□□□ -0.23
DTX4Q9Y2E6 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.59□□□□□ -0.23
DTX4Q9Y2E6 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
DTX4Q9Y2E6 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.59□□□□□ -0.23
DTX4Q9Y2E6 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
DTX4Q9Y2E6 FAS-202ENST00000352159 1722 ntTSL 5 BASIC13.59□□□□□ -0.23
DTX4Q9Y2E6 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
DTX4Q9Y2E6 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13.59□□□□□ -0.23
DTX4Q9Y2E6 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
DTX4Q9Y2E6 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
DTX4Q9Y2E6 AMT-239ENST00000636865 1914 ntTSL 5 BASIC13.59□□□□□ -0.23
DTX4Q9Y2E6 AC009093.10-201ENST00000641956 1442 ntBASIC13.59□□□□□ -0.23
DTX4Q9Y2E6 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
DTX4Q9Y2E6 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
DTX4Q9Y2E6 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC13.59□□□□□ -0.23
DTX4Q9Y2E6 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
DTX4Q9Y2E6 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
DTX4Q9Y2E6 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
DTX4Q9Y2E6 NDUFAB1P1-201ENST00000404262 460 ntBASIC13.59□□□□□ -0.23
DTX4Q9Y2E6 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC13.59□□□□□ -0.23
DTX4Q9Y2E6 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC13.59□□□□□ -0.23
DTX4Q9Y2E6 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC13.59□□□□□ -0.23
DTX4Q9Y2E6 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC13.59□□□□□ -0.23
DTX4Q9Y2E6 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC13.59□□□□□ -0.23
DTX4Q9Y2E6 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC13.59□□□□□ -0.23
DTX4Q9Y2E6 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC13.59□□□□□ -0.23
DTX4Q9Y2E6 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC13.59□□□□□ -0.23
DTX4Q9Y2E6 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC13.59□□□□□ -0.23
DTX4Q9Y2E6 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC13.59□□□□□ -0.23
DTX4Q9Y2E6 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC13.59□□□□□ -0.23
DTX4Q9Y2E6 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
DTX4Q9Y2E6 AC100827.2-201ENST00000563214 1194 ntBASIC13.59□□□□□ -0.23
DTX4Q9Y2E6 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC13.59□□□□□ -0.23
DTX4Q9Y2E6 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC13.59□□□□□ -0.23
DTX4Q9Y2E6 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
DTX4Q9Y2E6 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
DTX4Q9Y2E6 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC13.59□□□□□ -0.23
DTX4Q9Y2E6 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC13.59□□□□□ -0.23
DTX4Q9Y2E6 Z98259.2-201ENST00000641583 609 ntBASIC13.59□□□□□ -0.23
DTX4Q9Y2E6 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
DTX4Q9Y2E6 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
DTX4Q9Y2E6 MYO15B-237ENST00000642007 4893 ntBASIC13.59□□□□□ -0.23
DTX4Q9Y2E6 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
DTX4Q9Y2E6 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
DTX4Q9Y2E6 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
DTX4Q9Y2E6 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
DTX4Q9Y2E6 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC13.59□□□□□ -0.23
DTX4Q9Y2E6 AC090505.1-201ENST00000430515 1834 ntBASIC13.59□□□□□ -0.23
DTX4Q9Y2E6 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
DTX4Q9Y2E6 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
DTX4Q9Y2E6 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
DTX4Q9Y2E6 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
DTX4Q9Y2E6 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
DTX4Q9Y2E6 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13.59□□□□□ -0.23
DTX4Q9Y2E6 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
DTX4Q9Y2E6 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
DTX4Q9Y2E6 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
DTX4Q9Y2E6 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.59□□□□□ -0.23
DTX4Q9Y2E6 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
DTX4Q9Y2E6 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
DTX4Q9Y2E6 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
DTX4Q9Y2E6 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
DTX4Q9Y2E6 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
DTX4Q9Y2E6 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
DTX4Q9Y2E6 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
DTX4Q9Y2E6 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
DTX4Q9Y2E6 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC13.58□□□□□ -0.23
DTX4Q9Y2E6 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
DTX4Q9Y2E6 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
DTX4Q9Y2E6 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.58□□□□□ -0.23
DTX4Q9Y2E6 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.58□□□□□ -0.23
DTX4Q9Y2E6 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
DTX4Q9Y2E6 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
DTX4Q9Y2E6 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
DTX4Q9Y2E6 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
DTX4Q9Y2E6 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.58□□□□□ -0.24
DTX4Q9Y2E6 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
DTX4Q9Y2E6 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
DTX4Q9Y2E6 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
DTX4Q9Y2E6 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
DTX4Q9Y2E6 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
DTX4Q9Y2E6 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
DTX4Q9Y2E6 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
DTX4Q9Y2E6 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
DTX4Q9Y2E6 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
DTX4Q9Y2E6 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
DTX4Q9Y2E6 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC13.58□□□□□ -0.24
DTX4Q9Y2E6 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC13.58□□□□□ -0.24
DTX4Q9Y2E6 HNRNPA1P63-201ENST00000427917 963 ntBASIC13.58□□□□□ -0.24
DTX4Q9Y2E6 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
DTX4Q9Y2E6 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC13.58□□□□□ -0.24
DTX4Q9Y2E6 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC13.58□□□□□ -0.24
DTX4Q9Y2E6 HNRNPA1P36-201ENST00000521313 955 ntBASIC13.58□□□□□ -0.24
DTX4Q9Y2E6 IGHVIII-5-2-201ENST00000522505 261 ntBASIC13.58□□□□□ -0.24
DTX4Q9Y2E6 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC13.58□□□□□ -0.24
DTX4Q9Y2E6 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
DTX4Q9Y2E6 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
DTX4Q9Y2E6 SORD2P-201ENST00000558556 1069 ntBASIC13.58□□□□□ -0.24
DTX4Q9Y2E6 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms