Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SSX2IPQ9Y2D8 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
SSX2IPQ9Y2D8 AL008718.2-201ENST00000609206 1313 ntBASIC15.84■□□□□ 0.13
SSX2IPQ9Y2D8 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SSX2IPQ9Y2D8 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SSX2IPQ9Y2D8 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.84■□□□□ 0.13
SSX2IPQ9Y2D8 LILRP1-201ENST00000444199 1370 ntBASIC15.84■□□□□ 0.13
SSX2IPQ9Y2D8 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
SSX2IPQ9Y2D8 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.84■□□□□ 0.13
SSX2IPQ9Y2D8 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SSX2IPQ9Y2D8 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC15.84■□□□□ 0.13
SSX2IPQ9Y2D8 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SSX2IPQ9Y2D8 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC15.83■□□□□ 0.13
SSX2IPQ9Y2D8 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SSX2IPQ9Y2D8 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SSX2IPQ9Y2D8 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.83■□□□□ 0.13
SSX2IPQ9Y2D8 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC15.83■□□□□ 0.13
SSX2IPQ9Y2D8 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.83■□□□□ 0.13
SSX2IPQ9Y2D8 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
SSX2IPQ9Y2D8 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SSX2IPQ9Y2D8 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
SSX2IPQ9Y2D8 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC15.83■□□□□ 0.13
SSX2IPQ9Y2D8 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SSX2IPQ9Y2D8 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SSX2IPQ9Y2D8 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SSX2IPQ9Y2D8 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
SSX2IPQ9Y2D8 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
SSX2IPQ9Y2D8 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SSX2IPQ9Y2D8 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SSX2IPQ9Y2D8 ACTG1P2-201ENST00000415776 1125 ntBASIC15.83■□□□□ 0.12
SSX2IPQ9Y2D8 ACTG1P11-201ENST00000425411 1125 ntBASIC15.83■□□□□ 0.12
SSX2IPQ9Y2D8 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
SSX2IPQ9Y2D8 HLA-J-204ENST00000495278 958 ntBASIC15.83■□□□□ 0.12
SSX2IPQ9Y2D8 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
SSX2IPQ9Y2D8 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC15.83■□□□□ 0.12
SSX2IPQ9Y2D8 RN7SL574P-201ENST00000581512 297 ntBASIC15.83■□□□□ 0.12
SSX2IPQ9Y2D8 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC15.83■□□□□ 0.12
SSX2IPQ9Y2D8 AC079336.7-201ENST00000623428 1078 ntBASIC15.83■□□□□ 0.12
SSX2IPQ9Y2D8 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
SSX2IPQ9Y2D8 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
SSX2IPQ9Y2D8 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SSX2IPQ9Y2D8 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SSX2IPQ9Y2D8 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SSX2IPQ9Y2D8 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SSX2IPQ9Y2D8 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SSX2IPQ9Y2D8 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.83■□□□□ 0.12
SSX2IPQ9Y2D8 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SSX2IPQ9Y2D8 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.83■□□□□ 0.12
SSX2IPQ9Y2D8 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SSX2IPQ9Y2D8 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SSX2IPQ9Y2D8 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
SSX2IPQ9Y2D8 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SSX2IPQ9Y2D8 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC15.83■□□□□ 0.12
SSX2IPQ9Y2D8 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
SSX2IPQ9Y2D8 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SSX2IPQ9Y2D8 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SSX2IPQ9Y2D8 AC020910.5-201ENST00000623668 1865 ntBASIC15.82■□□□□ 0.12
SSX2IPQ9Y2D8 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.82■□□□□ 0.12
SSX2IPQ9Y2D8 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.82■□□□□ 0.12
SSX2IPQ9Y2D8 AC009093.2-202ENST00000620513 2079 ntBASIC15.82■□□□□ 0.12
SSX2IPQ9Y2D8 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SSX2IPQ9Y2D8 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.82■□□□□ 0.12
SSX2IPQ9Y2D8 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SSX2IPQ9Y2D8 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SSX2IPQ9Y2D8 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
SSX2IPQ9Y2D8 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.82■□□□□ 0.12
SSX2IPQ9Y2D8 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SSX2IPQ9Y2D8 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC15.82■□□□□ 0.12
SSX2IPQ9Y2D8 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SSX2IPQ9Y2D8 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SSX2IPQ9Y2D8 AC009779.1-201ENST00000551138 283 ntBASIC15.82■□□□□ 0.12
SSX2IPQ9Y2D8 AC008805.1-201ENST00000590892 364 ntBASIC15.82■□□□□ 0.12
SSX2IPQ9Y2D8 BX088702.1-201ENST00000610784 235 ntBASIC15.82■□□□□ 0.12
SSX2IPQ9Y2D8 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC15.82■□□□□ 0.12
SSX2IPQ9Y2D8 AL353770.1-201ENST00000614915 403 ntBASIC15.82■□□□□ 0.12
SSX2IPQ9Y2D8 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SSX2IPQ9Y2D8 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SSX2IPQ9Y2D8 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
SSX2IPQ9Y2D8 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SSX2IPQ9Y2D8 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
SSX2IPQ9Y2D8 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.82■□□□□ 0.12
SSX2IPQ9Y2D8 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.82■□□□□ 0.12
SSX2IPQ9Y2D8 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SSX2IPQ9Y2D8 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
SSX2IPQ9Y2D8 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SSX2IPQ9Y2D8 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SSX2IPQ9Y2D8 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SSX2IPQ9Y2D8 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
SSX2IPQ9Y2D8 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SSX2IPQ9Y2D8 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.82■□□□□ 0.12
SSX2IPQ9Y2D8 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SSX2IPQ9Y2D8 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
SSX2IPQ9Y2D8 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SSX2IPQ9Y2D8 AC005089.1-201ENST00000619486 2241 ntBASIC15.82■□□□□ 0.12
SSX2IPQ9Y2D8 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
SSX2IPQ9Y2D8 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
SSX2IPQ9Y2D8 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SSX2IPQ9Y2D8 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.81■□□□□ 0.12
SSX2IPQ9Y2D8 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SSX2IPQ9Y2D8 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms