Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RTN4Q9NQC3 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC17.61■□□□□ 0.41
RTN4Q9NQC3 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTN4Q9NQC3 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
RTN4Q9NQC3 CCL7-201ENST00000378569 810 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTN4Q9NQC3 CCL7-202ENST00000394627 696 ntTSL 3 BASIC17.61■□□□□ 0.41
RTN4Q9NQC3 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
RTN4Q9NQC3 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.61■□□□□ 0.41
RTN4Q9NQC3 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.61■□□□□ 0.41
RTN4Q9NQC3 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.61■□□□□ 0.41
RTN4Q9NQC3 PRYP6-201ENST00000514804 343 ntBASIC17.61■□□□□ 0.41
RTN4Q9NQC3 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.61■□□□□ 0.41
RTN4Q9NQC3 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
RTN4Q9NQC3 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RTN4Q9NQC3 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
RTN4Q9NQC3 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC17.61■□□□□ 0.41
RTN4Q9NQC3 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
RTN4Q9NQC3 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.61■□□□□ 0.41
RTN4Q9NQC3 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTN4Q9NQC3 IP6K1-202ENST00000395238 4117 ntTSL 3 BASIC17.61■□□□□ 0.41
RTN4Q9NQC3 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
RTN4Q9NQC3 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTN4Q9NQC3 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTN4Q9NQC3 AC015802.1-201ENST00000588104 1449 ntBASIC17.61■□□□□ 0.41
RTN4Q9NQC3 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.61■□□□□ 0.41
RTN4Q9NQC3 KIF17-202ENST00000375044 3572 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RTN4Q9NQC3 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
RTN4Q9NQC3 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
RTN4Q9NQC3 TNRC18P1-201ENST00000502875 3650 ntBASIC17.61■□□□□ 0.41
RTN4Q9NQC3 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC17.61■□□□□ 0.41
RTN4Q9NQC3 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTN4Q9NQC3 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTN4Q9NQC3 MCFD2-212ENST00000444761 4169 ntTSL 2 BASIC17.61■□□□□ 0.41
RTN4Q9NQC3 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
RTN4Q9NQC3 CTRC-201ENST00000375943 3147 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RTN4Q9NQC3 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
RTN4Q9NQC3 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTN4Q9NQC3 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RTN4Q9NQC3 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RTN4Q9NQC3 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTN4Q9NQC3 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTN4Q9NQC3 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTN4Q9NQC3 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC17.6■□□□□ 0.41
RTN4Q9NQC3 GOSR2-233ENST00000640068 3103 ntTSL 5 BASIC17.6■□□□□ 0.41
RTN4Q9NQC3 MOCS1-204ENST00000373188 3358 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RTN4Q9NQC3 BMP2-201ENST00000378827 3601 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTN4Q9NQC3 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTN4Q9NQC3 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTN4Q9NQC3 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTN4Q9NQC3 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RTN4Q9NQC3 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RTN4Q9NQC3 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RTN4Q9NQC3 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC17.6■□□□□ 0.41
RTN4Q9NQC3 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC17.6■□□□□ 0.41
RTN4Q9NQC3 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.6■□□□□ 0.41
RTN4Q9NQC3 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RTN4Q9NQC3 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.6■□□□□ 0.41
RTN4Q9NQC3 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.6■□□□□ 0.41
RTN4Q9NQC3 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTN4Q9NQC3 NOVA1-209ENST00000547619 947 ntTSL 3 BASIC17.6■□□□□ 0.41
RTN4Q9NQC3 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.6■□□□□ 0.41
RTN4Q9NQC3 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.6■□□□□ 0.41
RTN4Q9NQC3 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
RTN4Q9NQC3 RN7SL510P-201ENST00000581311 263 ntBASIC17.6■□□□□ 0.41
RTN4Q9NQC3 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
RTN4Q9NQC3 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
RTN4Q9NQC3 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RTN4Q9NQC3 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RTN4Q9NQC3 AL391262.2-201ENST00000622466 494 ntBASIC17.6■□□□□ 0.41
RTN4Q9NQC3 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTN4Q9NQC3 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RTN4Q9NQC3 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTN4Q9NQC3 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTN4Q9NQC3 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTN4Q9NQC3 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTN4Q9NQC3 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTN4Q9NQC3 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
RTN4Q9NQC3 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTN4Q9NQC3 MARVELD2-201ENST00000325631 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTN4Q9NQC3 CHGB-201ENST00000378961 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTN4Q9NQC3 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC17.6■□□□□ 0.41
RTN4Q9NQC3 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RTN4Q9NQC3 BAIAP3-207ENST00000562208 3663 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
RTN4Q9NQC3 AOC3-201ENST00000308423 4026 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTN4Q9NQC3 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
RTN4Q9NQC3 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
RTN4Q9NQC3 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RTN4Q9NQC3 CCDC148-201ENST00000283233 3122 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RTN4Q9NQC3 MARCH10-201ENST00000311269 3090 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
RTN4Q9NQC3 TRHDE-AS1-202ENST00000435350 2966 ntTSL 2 BASIC17.59■□□□□ 0.41
RTN4Q9NQC3 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC17.59■□□□□ 0.41
RTN4Q9NQC3 FAM214B-204ENST00000378566 2566 ntTSL 2 BASIC17.59■□□□□ 0.41
RTN4Q9NQC3 OPTN-206ENST00000378764 2498 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
RTN4Q9NQC3 CICP7-201ENST00000432723 2477 ntBASIC17.59■□□□□ 0.41
RTN4Q9NQC3 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC17.59■□□□□ 0.41
RTN4Q9NQC3 EYA4-206ENST00000431403 2154 ntTSL 5 BASIC17.59■□□□□ 0.41
RTN4Q9NQC3 AC023794.5-201ENST00000564380 2157 ntBASIC17.59■□□□□ 0.41
RTN4Q9NQC3 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
RTN4Q9NQC3 WASH6P-202ENST00000359512 1437 ntBASIC17.59■□□□□ 0.41
RTN4Q9NQC3 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms