Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CDH20Q9HBT6 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CDH20Q9HBT6 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CDH20Q9HBT6 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
CDH20Q9HBT6 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CDH20Q9HBT6 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
CDH20Q9HBT6 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CDH20Q9HBT6 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
CDH20Q9HBT6 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC12.91□□□□□ -0.34
CDH20Q9HBT6 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CDH20Q9HBT6 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
CDH20Q9HBT6 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC12.91□□□□□ -0.34
CDH20Q9HBT6 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CDH20Q9HBT6 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CDH20Q9HBT6 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
CDH20Q9HBT6 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CDH20Q9HBT6 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CDH20Q9HBT6 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC12.91□□□□□ -0.34
CDH20Q9HBT6 AL136309.1-201ENST00000403917 691 ntBASIC12.91□□□□□ -0.34
CDH20Q9HBT6 AC099336.1-201ENST00000417053 1171 ntBASIC12.91□□□□□ -0.34
CDH20Q9HBT6 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CDH20Q9HBT6 AL355994.2-201ENST00000447882 704 ntBASIC12.91□□□□□ -0.34
CDH20Q9HBT6 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC12.91□□□□□ -0.34
CDH20Q9HBT6 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CDH20Q9HBT6 PFN2-215ENST00000497148 743 ntTSL 4 BASIC12.91□□□□□ -0.34
CDH20Q9HBT6 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC12.91□□□□□ -0.34
CDH20Q9HBT6 AP006547.1-201ENST00000563435 692 ntBASIC12.91□□□□□ -0.34
CDH20Q9HBT6 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC12.91□□□□□ -0.34
CDH20Q9HBT6 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC12.91□□□□□ -0.34
CDH20Q9HBT6 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC12.91□□□□□ -0.34
CDH20Q9HBT6 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
CDH20Q9HBT6 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC12.91□□□□□ -0.34
CDH20Q9HBT6 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CDH20Q9HBT6 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CDH20Q9HBT6 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
CDH20Q9HBT6 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CDH20Q9HBT6 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
CDH20Q9HBT6 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CDH20Q9HBT6 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CDH20Q9HBT6 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CDH20Q9HBT6 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CDH20Q9HBT6 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
CDH20Q9HBT6 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC12.91□□□□□ -0.34
CDH20Q9HBT6 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDH20Q9HBT6 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CDH20Q9HBT6 MRPL37P1-201ENST00000592451 1337 ntBASIC12.9□□□□□ -0.34
CDH20Q9HBT6 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDH20Q9HBT6 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDH20Q9HBT6 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDH20Q9HBT6 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDH20Q9HBT6 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CDH20Q9HBT6 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC12.9□□□□□ -0.34
CDH20Q9HBT6 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDH20Q9HBT6 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CDH20Q9HBT6 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
CDH20Q9HBT6 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CDH20Q9HBT6 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDH20Q9HBT6 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDH20Q9HBT6 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CDH20Q9HBT6 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CDH20Q9HBT6 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDH20Q9HBT6 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDH20Q9HBT6 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDH20Q9HBT6 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDH20Q9HBT6 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CDH20Q9HBT6 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
CDH20Q9HBT6 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
CDH20Q9HBT6 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
CDH20Q9HBT6 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC12.9□□□□□ -0.34
CDH20Q9HBT6 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CDH20Q9HBT6 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
CDH20Q9HBT6 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC12.9□□□□□ -0.34
CDH20Q9HBT6 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC12.9□□□□□ -0.34
CDH20Q9HBT6 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC12.9□□□□□ -0.34
CDH20Q9HBT6 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDH20Q9HBT6 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC12.9□□□□□ -0.34
CDH20Q9HBT6 CNN2P10-201ENST00000443067 918 ntBASIC12.9□□□□□ -0.34
CDH20Q9HBT6 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDH20Q9HBT6 AC131206.1-201ENST00000538078 1211 ntBASIC12.9□□□□□ -0.34
CDH20Q9HBT6 VPS18-202ENST00000558474 873 ntTSL 3 BASIC12.9□□□□□ -0.34
CDH20Q9HBT6 HNRNPA1P48-202ENST00000565308 961 ntBASIC12.9□□□□□ -0.34
CDH20Q9HBT6 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC12.9□□□□□ -0.34
CDH20Q9HBT6 AC010328.2-201ENST00000597698 1111 ntBASIC12.9□□□□□ -0.34
CDH20Q9HBT6 AC073413.1-201ENST00000603927 732 ntBASIC12.9□□□□□ -0.34
CDH20Q9HBT6 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC12.9□□□□□ -0.34
CDH20Q9HBT6 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC12.9□□□□□ -0.34
CDH20Q9HBT6 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
CDH20Q9HBT6 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDH20Q9HBT6 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
CDH20Q9HBT6 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC12.9□□□□□ -0.34
CDH20Q9HBT6 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CDH20Q9HBT6 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDH20Q9HBT6 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CDH20Q9HBT6 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
CDH20Q9HBT6 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDH20Q9HBT6 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDH20Q9HBT6 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDH20Q9HBT6 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
CDH20Q9HBT6 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDH20Q9HBT6 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms