Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM4Q9C037 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM4Q9C037 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC14.87□□□□□ -0.03
TRIM4Q9C037 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
TRIM4Q9C037 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM4Q9C037 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.87□□□□□ -0.03
TRIM4Q9C037 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.87□□□□□ -0.03
TRIM4Q9C037 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM4Q9C037 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM4Q9C037 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC14.87□□□□□ -0.03
TRIM4Q9C037 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC14.87□□□□□ -0.03
TRIM4Q9C037 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM4Q9C037 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM4Q9C037 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.87□□□□□ -0.03
TRIM4Q9C037 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.87□□□□□ -0.03
TRIM4Q9C037 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM4Q9C037 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM4Q9C037 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC14.87□□□□□ -0.03
TRIM4Q9C037 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM4Q9C037 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
TRIM4Q9C037 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM4Q9C037 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM4Q9C037 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
TRIM4Q9C037 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.87□□□□□ -0.03
TRIM4Q9C037 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM4Q9C037 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC14.86□□□□□ -0.03
TRIM4Q9C037 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
TRIM4Q9C037 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.86□□□□□ -0.03
TRIM4Q9C037 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM4Q9C037 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM4Q9C037 AL118506.1-201ENST00000601296 3082 ntBASIC14.86□□□□□ -0.03
TRIM4Q9C037 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC14.86□□□□□ -0.03
TRIM4Q9C037 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
TRIM4Q9C037 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM4Q9C037 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.86□□□□□ -0.03
TRIM4Q9C037 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
TRIM4Q9C037 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.86□□□□□ -0.03
TRIM4Q9C037 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC14.86□□□□□ -0.03
TRIM4Q9C037 ZNF890P-202ENST00000530367 1156 ntBASIC14.86□□□□□ -0.03
TRIM4Q9C037 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.86□□□□□ -0.03
TRIM4Q9C037 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.86□□□□□ -0.03
TRIM4Q9C037 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.86□□□□□ -0.03
TRIM4Q9C037 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC14.86□□□□□ -0.03
TRIM4Q9C037 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.86□□□□□ -0.03
TRIM4Q9C037 AC010319.3-201ENST00000597028 470 ntBASIC14.86□□□□□ -0.03
TRIM4Q9C037 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.86□□□□□ -0.03
TRIM4Q9C037 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.86□□□□□ -0.03
TRIM4Q9C037 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.86□□□□□ -0.03
TRIM4Q9C037 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM4Q9C037 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM4Q9C037 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM4Q9C037 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM4Q9C037 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM4Q9C037 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.86□□□□□ -0.03
TRIM4Q9C037 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM4Q9C037 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.86□□□□□ -0.03
TRIM4Q9C037 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
TRIM4Q9C037 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
TRIM4Q9C037 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
TRIM4Q9C037 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM4Q9C037 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
TRIM4Q9C037 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.85□□□□□ -0.03
TRIM4Q9C037 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM4Q9C037 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM4Q9C037 CICP16-201ENST00000502609 2813 ntBASIC14.85□□□□□ -0.03
TRIM4Q9C037 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
TRIM4Q9C037 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
TRIM4Q9C037 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM4Q9C037 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM4Q9C037 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM4Q9C037 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM4Q9C037 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM4Q9C037 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
TRIM4Q9C037 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM4Q9C037 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM4Q9C037 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM4Q9C037 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.85□□□□□ -0.03
TRIM4Q9C037 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.85□□□□□ -0.03
TRIM4Q9C037 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
TRIM4Q9C037 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM4Q9C037 FOS-206ENST00000555347 1280 ntTSL 2 BASIC14.85□□□□□ -0.03
TRIM4Q9C037 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.85□□□□□ -0.03
TRIM4Q9C037 BTNL10-201ENST00000595971 695 ntBASIC14.85□□□□□ -0.03
TRIM4Q9C037 AC093726.1-201ENST00000608064 963 ntBASIC14.85□□□□□ -0.03
TRIM4Q9C037 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.85□□□□□ -0.03
TRIM4Q9C037 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC14.85□□□□□ -0.03
TRIM4Q9C037 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.85□□□□□ -0.03
TRIM4Q9C037 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.85□□□□□ -0.03
TRIM4Q9C037 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
TRIM4Q9C037 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM4Q9C037 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC14.85□□□□□ -0.03
TRIM4Q9C037 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM4Q9C037 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM4Q9C037 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC14.85□□□□□ -0.03
TRIM4Q9C037 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM4Q9C037 TUBB1P2-201ENST00000422712 1306 ntBASIC14.85□□□□□ -0.03
TRIM4Q9C037 TUBB1P1-201ENST00000503144 1300 ntBASIC14.85□□□□□ -0.03
TRIM4Q9C037 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM4Q9C037 AC131212.3-201ENST00000624087 4219 ntBASIC14.85□□□□□ -0.03
TRIM4Q9C037 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms