Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RTFDC1Q9BY42 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RTFDC1Q9BY42 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RTFDC1Q9BY42 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RTFDC1Q9BY42 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
RTFDC1Q9BY42 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RTFDC1Q9BY42 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RTFDC1Q9BY42 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RTFDC1Q9BY42 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RTFDC1Q9BY42 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
RTFDC1Q9BY42 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
RTFDC1Q9BY42 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC17.52■□□□□ 0.4
RTFDC1Q9BY42 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RTFDC1Q9BY42 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RTFDC1Q9BY42 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RTFDC1Q9BY42 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RTFDC1Q9BY42 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
RTFDC1Q9BY42 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
RTFDC1Q9BY42 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC17.52■□□□□ 0.4
RTFDC1Q9BY42 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC17.52■□□□□ 0.4
RTFDC1Q9BY42 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
RTFDC1Q9BY42 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC17.52■□□□□ 0.4
RTFDC1Q9BY42 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC17.52■□□□□ 0.4
RTFDC1Q9BY42 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC17.52■□□□□ 0.4
RTFDC1Q9BY42 AC012158.2-201ENST00000536546 354 ntBASIC17.52■□□□□ 0.4
RTFDC1Q9BY42 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC17.52■□□□□ 0.4
RTFDC1Q9BY42 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC17.52■□□□□ 0.4
RTFDC1Q9BY42 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RTFDC1Q9BY42 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RTFDC1Q9BY42 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RTFDC1Q9BY42 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RTFDC1Q9BY42 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
RTFDC1Q9BY42 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
RTFDC1Q9BY42 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
RTFDC1Q9BY42 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RTFDC1Q9BY42 AL591122.2-201ENST00000624125 1853 ntBASIC17.52■□□□□ 0.39
RTFDC1Q9BY42 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RTFDC1Q9BY42 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
RTFDC1Q9BY42 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC17.52■□□□□ 0.39
RTFDC1Q9BY42 FAM90A21P-201ENST00000510875 1396 ntBASIC17.52■□□□□ 0.39
RTFDC1Q9BY42 FAM90A15P-201ENST00000514465 1395 ntBASIC17.52■□□□□ 0.39
RTFDC1Q9BY42 FAM90A6P-201ENST00000515148 1394 ntBASIC17.52■□□□□ 0.39
RTFDC1Q9BY42 FAM90A16P-201ENST00000526662 1395 ntBASIC17.52■□□□□ 0.39
RTFDC1Q9BY42 FAM90A9P-201ENST00000527940 1395 ntBASIC17.52■□□□□ 0.39
RTFDC1Q9BY42 FAM90A5P-201ENST00000528738 1395 ntBASIC17.52■□□□□ 0.39
RTFDC1Q9BY42 FAM90A14P-201ENST00000530386 1395 ntBASIC17.52■□□□□ 0.39
RTFDC1Q9BY42 FAM90A13P-201ENST00000534703 1395 ntBASIC17.52■□□□□ 0.39
RTFDC1Q9BY42 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.52■□□□□ 0.39
RTFDC1Q9BY42 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
RTFDC1Q9BY42 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.52■□□□□ 0.39
RTFDC1Q9BY42 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
RTFDC1Q9BY42 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTFDC1Q9BY42 MX1-218ENST00000619682 1980 ntTSL 5 BASIC17.51■□□□□ 0.39
RTFDC1Q9BY42 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTFDC1Q9BY42 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC17.51■□□□□ 0.39
RTFDC1Q9BY42 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RTFDC1Q9BY42 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTFDC1Q9BY42 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RTFDC1Q9BY42 CROCCP1-201ENST00000426910 5675 ntBASIC17.51■□□□□ 0.39
RTFDC1Q9BY42 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
RTFDC1Q9BY42 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTFDC1Q9BY42 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RTFDC1Q9BY42 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTFDC1Q9BY42 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTFDC1Q9BY42 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RTFDC1Q9BY42 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC17.51■□□□□ 0.39
RTFDC1Q9BY42 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC17.51■□□□□ 0.39
RTFDC1Q9BY42 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC17.51■□□□□ 0.39
RTFDC1Q9BY42 RN7SL494P-201ENST00000461517 304 ntBASIC17.51■□□□□ 0.39
RTFDC1Q9BY42 IGHV1-12-201ENST00000518307 205 ntBASIC17.51■□□□□ 0.39
RTFDC1Q9BY42 FAM86B3P-203ENST00000523992 854 ntBASIC17.51■□□□□ 0.39
RTFDC1Q9BY42 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTFDC1Q9BY42 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC17.51■□□□□ 0.39
RTFDC1Q9BY42 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC17.51■□□□□ 0.39
RTFDC1Q9BY42 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC17.51■□□□□ 0.39
RTFDC1Q9BY42 AL118522.1-201ENST00000611368 560 ntBASIC17.51■□□□□ 0.39
RTFDC1Q9BY42 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC17.51■□□□□ 0.39
RTFDC1Q9BY42 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTFDC1Q9BY42 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTFDC1Q9BY42 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RTFDC1Q9BY42 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTFDC1Q9BY42 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTFDC1Q9BY42 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTFDC1Q9BY42 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTFDC1Q9BY42 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTFDC1Q9BY42 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTFDC1Q9BY42 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC17.51■□□□□ 0.39
RTFDC1Q9BY42 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC17.51■□□□□ 0.39
RTFDC1Q9BY42 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RTFDC1Q9BY42 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC17.5■□□□□ 0.39
RTFDC1Q9BY42 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTFDC1Q9BY42 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RTFDC1Q9BY42 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
RTFDC1Q9BY42 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTFDC1Q9BY42 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
RTFDC1Q9BY42 AC067931.2-201ENST00000623655 2003 ntBASIC17.5■□□□□ 0.39
RTFDC1Q9BY42 CTBP2P8-201ENST00000422584 1330 ntBASIC17.5■□□□□ 0.39
RTFDC1Q9BY42 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RTFDC1Q9BY42 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.5■□□□□ 0.39
RTFDC1Q9BY42 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms