Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
VRK1Q99986 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VRK1Q99986 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.1□□□□□ -0.31
VRK1Q99986 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.1□□□□□ -0.31
VRK1Q99986 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VRK1Q99986 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
VRK1Q99986 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
VRK1Q99986 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
VRK1Q99986 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
VRK1Q99986 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
VRK1Q99986 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VRK1Q99986 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VRK1Q99986 REXO1L6P-201ENST00000603433 1515 ntBASIC13.1□□□□□ -0.31
VRK1Q99986 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
VRK1Q99986 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
VRK1Q99986 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.1□□□□□ -0.31
VRK1Q99986 PGGT1BP2-201ENST00000398621 1028 ntBASIC13.1□□□□□ -0.31
VRK1Q99986 BRWD1P1-201ENST00000401091 371 ntBASIC13.1□□□□□ -0.31
VRK1Q99986 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.1□□□□□ -0.31
VRK1Q99986 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
VRK1Q99986 CSF2RBP1-201ENST00000447905 391 ntBASIC13.1□□□□□ -0.31
VRK1Q99986 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.1□□□□□ -0.31
VRK1Q99986 RPL8-205ENST00000527914 551 ntTSL 3 BASIC13.1□□□□□ -0.31
VRK1Q99986 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC13.1□□□□□ -0.31
VRK1Q99986 AL033527.4-201ENST00000641026 673 ntBASIC13.1□□□□□ -0.31
VRK1Q99986 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
VRK1Q99986 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.1□□□□□ -0.31
VRK1Q99986 COL6A4P2-202ENST00000504443 2753 ntBASIC13.1□□□□□ -0.31
VRK1Q99986 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
VRK1Q99986 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
VRK1Q99986 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
VRK1Q99986 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VRK1Q99986 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.1□□□□□ -0.31
VRK1Q99986 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VRK1Q99986 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC13.1□□□□□ -0.31
VRK1Q99986 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC13.1□□□□□ -0.31
VRK1Q99986 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.1□□□□□ -0.31
VRK1Q99986 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VRK1Q99986 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.1□□□□□ -0.31
VRK1Q99986 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VRK1Q99986 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.1□□□□□ -0.31
VRK1Q99986 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
VRK1Q99986 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.1□□□□□ -0.31
VRK1Q99986 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.1□□□□□ -0.31
VRK1Q99986 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
VRK1Q99986 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
VRK1Q99986 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
VRK1Q99986 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VRK1Q99986 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC13.1□□□□□ -0.31
VRK1Q99986 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC13.1□□□□□ -0.31
VRK1Q99986 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VRK1Q99986 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
VRK1Q99986 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.09□□□□□ -0.31
VRK1Q99986 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
VRK1Q99986 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
VRK1Q99986 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
VRK1Q99986 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
VRK1Q99986 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
VRK1Q99986 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.09□□□□□ -0.31
VRK1Q99986 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
VRK1Q99986 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VRK1Q99986 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VRK1Q99986 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.09□□□□□ -0.31
VRK1Q99986 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
VRK1Q99986 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
VRK1Q99986 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VRK1Q99986 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VRK1Q99986 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
VRK1Q99986 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VRK1Q99986 APOC3-202ENST00000375345 604 ntTSL 5 BASIC13.09□□□□□ -0.31
VRK1Q99986 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VRK1Q99986 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
VRK1Q99986 AC099336.1-201ENST00000417053 1171 ntBASIC13.09□□□□□ -0.31
VRK1Q99986 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC13.09□□□□□ -0.31
VRK1Q99986 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VRK1Q99986 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC13.09□□□□□ -0.31
VRK1Q99986 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.09□□□□□ -0.31
VRK1Q99986 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.09□□□□□ -0.31
VRK1Q99986 AC004066.1-201ENST00000502488 802 ntBASIC13.09□□□□□ -0.31
VRK1Q99986 AC092658.1-201ENST00000505836 891 ntBASIC13.09□□□□□ -0.31
VRK1Q99986 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC13.09□□□□□ -0.31
VRK1Q99986 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
VRK1Q99986 AC079316.1-201ENST00000548397 411 ntBASIC13.09□□□□□ -0.31
VRK1Q99986 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
VRK1Q99986 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
VRK1Q99986 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
VRK1Q99986 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VRK1Q99986 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.09□□□□□ -0.31
VRK1Q99986 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC13.09□□□□□ -0.31
VRK1Q99986 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.09□□□□□ -0.31
VRK1Q99986 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
VRK1Q99986 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC13.09□□□□□ -0.31
VRK1Q99986 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC13.09□□□□□ -0.31
VRK1Q99986 LARP4-220ENST00000615080 856 ntTSL 5 BASIC13.09□□□□□ -0.31
VRK1Q99986 AC145423.3-201ENST00000615987 467 ntBASIC13.09□□□□□ -0.31
VRK1Q99986 AL031595.1-201ENST00000623969 4709 ntBASIC13.09□□□□□ -0.31
VRK1Q99986 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.09□□□□□ -0.31
VRK1Q99986 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VRK1Q99986 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
VRK1Q99986 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms