Protein–RNA interactions for Protein: Q99731

CCL19, C-C motif chemokine 19, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL19Q99731 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL19Q99731 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC12.3□□□□□ -0.44
CCL19Q99731 HERC2P11-201ENST00000562845 725 ntBASIC12.3□□□□□ -0.44
CCL19Q99731 AC100756.2-201ENST00000569537 736 ntBASIC12.3□□□□□ -0.44
CCL19Q99731 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC12.3□□□□□ -0.44
CCL19Q99731 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CCL19Q99731 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC12.3□□□□□ -0.44
CCL19Q99731 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC12.3□□□□□ -0.44
CCL19Q99731 AC084781.1-201ENST00000613737 656 ntBASIC12.3□□□□□ -0.44
CCL19Q99731 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
CCL19Q99731 AL591471.1-201ENST00000621855 229 ntBASIC12.3□□□□□ -0.44
CCL19Q99731 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL19Q99731 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL19Q99731 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC12.3□□□□□ -0.44
CCL19Q99731 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CCL19Q99731 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL19Q99731 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
CCL19Q99731 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL19Q99731 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC12.3□□□□□ -0.44
CCL19Q99731 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL19Q99731 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL19Q99731 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CCL19Q99731 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL19Q99731 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CCL19Q99731 SSR4P1-203ENST00000599569 2260 ntBASIC12.3□□□□□ -0.44
CCL19Q99731 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL19Q99731 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL19Q99731 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL19Q99731 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC12.29□□□□□ -0.44
CCL19Q99731 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
CCL19Q99731 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC12.29□□□□□ -0.44
CCL19Q99731 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL19Q99731 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL19Q99731 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC12.29□□□□□ -0.44
CCL19Q99731 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC12.29□□□□□ -0.44
CCL19Q99731 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CCL19Q99731 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CCL19Q99731 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL19Q99731 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC12.29□□□□□ -0.44
CCL19Q99731 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL19Q99731 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
CCL19Q99731 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL19Q99731 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL19Q99731 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CCL19Q99731 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
CCL19Q99731 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
CCL19Q99731 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC12.29□□□□□ -0.44
CCL19Q99731 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL19Q99731 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CCL19Q99731 MIR1227-201ENST00000408484 88 ntBASIC12.29□□□□□ -0.44
CCL19Q99731 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC12.29□□□□□ -0.44
CCL19Q99731 AC073869.2-201ENST00000417338 1026 ntBASIC12.29□□□□□ -0.44
CCL19Q99731 AL512306.1-201ENST00000432698 848 ntBASIC12.29□□□□□ -0.44
CCL19Q99731 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC12.29□□□□□ -0.44
CCL19Q99731 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CCL19Q99731 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
CCL19Q99731 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC12.29□□□□□ -0.44
CCL19Q99731 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL19Q99731 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC12.29□□□□□ -0.44
CCL19Q99731 TMCO5B-205ENST00000530020 894 ntBASIC12.29□□□□□ -0.44
CCL19Q99731 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC12.29□□□□□ -0.44
CCL19Q99731 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC12.29□□□□□ -0.44
CCL19Q99731 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC12.29□□□□□ -0.44
CCL19Q99731 DBP-202ENST00000593500 712 ntTSL 2 BASIC12.29□□□□□ -0.44
CCL19Q99731 AC138466.4-201ENST00000623965 852 ntBASIC12.29□□□□□ -0.44
CCL19Q99731 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL19Q99731 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL19Q99731 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL19Q99731 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL19Q99731 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CCL19Q99731 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL19Q99731 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC12.29□□□□□ -0.44
CCL19Q99731 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
CCL19Q99731 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
CCL19Q99731 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC12.29□□□□□ -0.44
CCL19Q99731 AC139712.1-201ENST00000378256 1875 ntBASIC12.29□□□□□ -0.44
CCL19Q99731 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL19Q99731 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC12.29□□□□□ -0.44
CCL19Q99731 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC12.29□□□□□ -0.44
CCL19Q99731 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL19Q99731 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL19Q99731 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC12.29□□□□□ -0.44
CCL19Q99731 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CCL19Q99731 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC12.29□□□□□ -0.44
CCL19Q99731 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL19Q99731 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL19Q99731 PCDHGB8P-201ENST00000502926 1973 ntBASIC12.29□□□□□ -0.44
CCL19Q99731 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL19Q99731 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCL19Q99731 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC12.28□□□□□ -0.44
CCL19Q99731 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
CCL19Q99731 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCL19Q99731 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCL19Q99731 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC12.28□□□□□ -0.44
CCL19Q99731 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCL19Q99731 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCL19Q99731 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCL19Q99731 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC12.28□□□□□ -0.44
CCL19Q99731 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
CCL19Q99731 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms