Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 F10-203ENST00000409306 1450 ntTSL 3 BASIC11.49□□□□□ -0.57
TRGV9Q99603 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TRGV9Q99603 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC11.49□□□□□ -0.57
TRGV9Q99603 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TRGV9Q99603 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC11.49□□□□□ -0.57
TRGV9Q99603 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC11.49□□□□□ -0.57
TRGV9Q99603 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC11.49□□□□□ -0.57
TRGV9Q99603 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TRGV9Q99603 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TRGV9Q99603 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TRGV9Q99603 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC11.49□□□□□ -0.57
TRGV9Q99603 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
TRGV9Q99603 CETP-203ENST00000566128 1733 ntTSL 5 BASIC11.49□□□□□ -0.57
TRGV9Q99603 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC11.49□□□□□ -0.57
TRGV9Q99603 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
TRGV9Q99603 RET-205ENST00000615310 4337 ntTSL 5 BASIC11.49□□□□□ -0.57
TRGV9Q99603 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
TRGV9Q99603 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC11.48□□□□□ -0.57
TRGV9Q99603 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
TRGV9Q99603 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC11.48□□□□□ -0.57
TRGV9Q99603 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC11.48□□□□□ -0.57
TRGV9Q99603 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV9Q99603 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV9Q99603 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV9Q99603 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC11.48□□□□□ -0.57
TRGV9Q99603 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC11.48□□□□□ -0.57
TRGV9Q99603 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
TRGV9Q99603 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
TRGV9Q99603 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV9Q99603 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV9Q99603 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV9Q99603 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV9Q99603 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
TRGV9Q99603 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV9Q99603 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV9Q99603 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV9Q99603 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV9Q99603 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV9Q99603 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
TRGV9Q99603 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
TRGV9Q99603 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV9Q99603 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV9Q99603 AC087499.6-201ENST00000411576 835 ntBASIC11.48□□□□□ -0.57
TRGV9Q99603 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV9Q99603 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC11.48□□□□□ -0.57
TRGV9Q99603 AL162726.2-201ENST00000438986 1017 ntBASIC11.48□□□□□ -0.57
TRGV9Q99603 MYCLP2-201ENST00000449268 967 ntBASIC11.48□□□□□ -0.57
TRGV9Q99603 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV9Q99603 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV9Q99603 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV9Q99603 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV9Q99603 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC11.48□□□□□ -0.57
TRGV9Q99603 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC11.48□□□□□ -0.57
TRGV9Q99603 ATF5-205ENST00000600336 682 ntTSL 2 BASIC11.48□□□□□ -0.57
TRGV9Q99603 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV9Q99603 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV9Q99603 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
TRGV9Q99603 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV9Q99603 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV9Q99603 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
TRGV9Q99603 AL590440.2-201ENST00000641973 1595 ntBASIC11.48□□□□□ -0.57
TRGV9Q99603 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC11.48□□□□□ -0.57
TRGV9Q99603 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV9Q99603 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV9Q99603 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV9Q99603 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
TRGV9Q99603 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV9Q99603 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV9Q99603 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC11.48□□□□□ -0.57
TRGV9Q99603 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV9Q99603 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV9Q99603 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV9Q99603 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV9Q99603 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC11.48□□□□□ -0.57
TRGV9Q99603 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
TRGV9Q99603 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC11.48□□□□□ -0.57
TRGV9Q99603 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV9Q99603 AC131212.3-201ENST00000624087 4219 ntBASIC11.48□□□□□ -0.57
TRGV9Q99603 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC11.48□□□□□ -0.57
TRGV9Q99603 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
TRGV9Q99603 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV9Q99603 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV9Q99603 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV9Q99603 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
TRGV9Q99603 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV9Q99603 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC11.47□□□□□ -0.57
TRGV9Q99603 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV9Q99603 APP-205ENST00000358918 2366 ntTSL 5 BASIC11.47□□□□□ -0.57
TRGV9Q99603 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
TRGV9Q99603 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC11.47□□□□□ -0.57
TRGV9Q99603 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC11.47□□□□□ -0.57
TRGV9Q99603 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
TRGV9Q99603 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC11.47□□□□□ -0.57
TRGV9Q99603 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC11.47□□□□□ -0.57
TRGV9Q99603 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV9Q99603 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC11.47□□□□□ -0.57
TRGV9Q99603 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC11.47□□□□□ -0.57
TRGV9Q99603 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV9Q99603 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV9Q99603 CLUHP2-201ENST00000426660 1303 ntBASIC11.47□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms