Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SYNGAP1Q96PV0 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SYNGAP1Q96PV0 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC16.63■□□□□ 0.25
SYNGAP1Q96PV0 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SYNGAP1Q96PV0 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
SYNGAP1Q96PV0 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC16.63■□□□□ 0.25
SYNGAP1Q96PV0 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SYNGAP1Q96PV0 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC16.63■□□□□ 0.25
SYNGAP1Q96PV0 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SYNGAP1Q96PV0 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SYNGAP1Q96PV0 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC16.63■□□□□ 0.25
SYNGAP1Q96PV0 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SYNGAP1Q96PV0 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC16.63■□□□□ 0.25
SYNGAP1Q96PV0 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC16.63■□□□□ 0.25
SYNGAP1Q96PV0 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC16.63■□□□□ 0.25
SYNGAP1Q96PV0 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC16.63■□□□□ 0.25
SYNGAP1Q96PV0 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
SYNGAP1Q96PV0 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC16.63■□□□□ 0.25
SYNGAP1Q96PV0 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC16.63■□□□□ 0.25
SYNGAP1Q96PV0 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SYNGAP1Q96PV0 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
SYNGAP1Q96PV0 AC013726.1-201ENST00000563747 2285 ntBASIC16.63■□□□□ 0.25
SYNGAP1Q96PV0 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SYNGAP1Q96PV0 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SYNGAP1Q96PV0 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC16.62■□□□□ 0.25
SYNGAP1Q96PV0 SF1-209ENST00000433274 2317 ntTSL 2 BASIC16.62■□□□□ 0.25
SYNGAP1Q96PV0 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC16.62■□□□□ 0.25
SYNGAP1Q96PV0 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SYNGAP1Q96PV0 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SYNGAP1Q96PV0 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SYNGAP1Q96PV0 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
SYNGAP1Q96PV0 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SYNGAP1Q96PV0 TMBIM7P-202ENST00000641474 1516 ntBASIC16.62■□□□□ 0.25
SYNGAP1Q96PV0 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SYNGAP1Q96PV0 API5-203ENST00000455725 2257 ntTSL 2 BASIC16.62■□□□□ 0.25
SYNGAP1Q96PV0 AHCYP4-201ENST00000419201 1315 ntBASIC16.62■□□□□ 0.25
SYNGAP1Q96PV0 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SYNGAP1Q96PV0 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC16.62■□□□□ 0.25
SYNGAP1Q96PV0 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SYNGAP1Q96PV0 AL136379.1-201ENST00000623471 2642 ntBASIC16.62■□□□□ 0.25
SYNGAP1Q96PV0 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SYNGAP1Q96PV0 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
SYNGAP1Q96PV0 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.62■□□□□ 0.25
SYNGAP1Q96PV0 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SYNGAP1Q96PV0 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SYNGAP1Q96PV0 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SYNGAP1Q96PV0 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SYNGAP1Q96PV0 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SYNGAP1Q96PV0 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC16.62■□□□□ 0.25
SYNGAP1Q96PV0 HNRNPA1P27-201ENST00000412087 955 ntBASIC16.62■□□□□ 0.25
SYNGAP1Q96PV0 AL592076.1-201ENST00000424448 303 ntBASIC16.62■□□□□ 0.25
SYNGAP1Q96PV0 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SYNGAP1Q96PV0 AC130709.1-201ENST00000484779 1212 ntBASIC16.62■□□□□ 0.25
SYNGAP1Q96PV0 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC16.62■□□□□ 0.25
SYNGAP1Q96PV0 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC16.62■□□□□ 0.25
SYNGAP1Q96PV0 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC16.62■□□□□ 0.25
SYNGAP1Q96PV0 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC16.62■□□□□ 0.25
SYNGAP1Q96PV0 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC16.62■□□□□ 0.25
SYNGAP1Q96PV0 AC242376.2-201ENST00000619355 883 ntBASIC16.62■□□□□ 0.25
SYNGAP1Q96PV0 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SYNGAP1Q96PV0 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC16.62■□□□□ 0.25
SYNGAP1Q96PV0 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SYNGAP1Q96PV0 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SYNGAP1Q96PV0 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC16.62■□□□□ 0.25
SYNGAP1Q96PV0 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
SYNGAP1Q96PV0 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SYNGAP1Q96PV0 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SYNGAP1Q96PV0 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SYNGAP1Q96PV0 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SYNGAP1Q96PV0 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC16.61■□□□□ 0.25
SYNGAP1Q96PV0 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC16.61■□□□□ 0.25
SYNGAP1Q96PV0 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC16.61■□□□□ 0.25
SYNGAP1Q96PV0 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SYNGAP1Q96PV0 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SYNGAP1Q96PV0 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SYNGAP1Q96PV0 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SYNGAP1Q96PV0 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SYNGAP1Q96PV0 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SYNGAP1Q96PV0 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SYNGAP1Q96PV0 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SYNGAP1Q96PV0 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.61■□□□□ 0.25
SYNGAP1Q96PV0 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SYNGAP1Q96PV0 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SYNGAP1Q96PV0 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SYNGAP1Q96PV0 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SYNGAP1Q96PV0 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SYNGAP1Q96PV0 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SYNGAP1Q96PV0 CICP23-201ENST00000605013 2741 ntBASIC16.61■□□□□ 0.25
SYNGAP1Q96PV0 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SYNGAP1Q96PV0 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SYNGAP1Q96PV0 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SYNGAP1Q96PV0 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
SYNGAP1Q96PV0 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC16.61■□□□□ 0.25
SYNGAP1Q96PV0 TSPY25P-201ENST00000429463 745 ntBASIC16.61■□□□□ 0.25
SYNGAP1Q96PV0 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC16.61■□□□□ 0.25
SYNGAP1Q96PV0 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC16.61■□□□□ 0.25
SYNGAP1Q96PV0 RN7SL8P-201ENST00000461771 266 ntBASIC16.61■□□□□ 0.25
SYNGAP1Q96PV0 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
SYNGAP1Q96PV0 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC16.61■□□□□ 0.25
SYNGAP1Q96PV0 PGAM1P5-201ENST00000548011 764 ntBASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms