Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC15.55■□□□□ 0.08
TRIM11Q96F44 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TRIM11Q96F44 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM11Q96F44 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM11Q96F44 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
TRIM11Q96F44 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM11Q96F44 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC15.55■□□□□ 0.08
TRIM11Q96F44 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC15.55■□□□□ 0.08
TRIM11Q96F44 KRT8P28-201ENST00000433288 1390 ntBASIC15.55■□□□□ 0.08
TRIM11Q96F44 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TRIM11Q96F44 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM11Q96F44 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM11Q96F44 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM11Q96F44 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM11Q96F44 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM11Q96F44 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM11Q96F44 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.55■□□□□ 0.08
TRIM11Q96F44 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM11Q96F44 MPV17-205ENST00000402310 906 ntTSL 5 BASIC15.55■□□□□ 0.08
TRIM11Q96F44 AC016694.1-201ENST00000434179 700 ntBASIC15.55■□□□□ 0.08
TRIM11Q96F44 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC15.55■□□□□ 0.08
TRIM11Q96F44 TTTY23B-201ENST00000442790 549 ntBASIC15.55■□□□□ 0.08
TRIM11Q96F44 BCRP2-202ENST00000447763 634 ntBASIC15.55■□□□□ 0.08
TRIM11Q96F44 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC15.55■□□□□ 0.08
TRIM11Q96F44 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM11Q96F44 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.55■□□□□ 0.08
TRIM11Q96F44 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC15.55■□□□□ 0.08
TRIM11Q96F44 BCRP6-201ENST00000510112 632 ntBASIC15.55■□□□□ 0.08
TRIM11Q96F44 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM11Q96F44 BCRP7-201ENST00000511549 544 ntBASIC15.55■□□□□ 0.08
TRIM11Q96F44 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.55■□□□□ 0.08
TRIM11Q96F44 FUZ-207ENST00000526575 482 ntTSL 4 BASIC15.55■□□□□ 0.08
TRIM11Q96F44 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM11Q96F44 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15.55■□□□□ 0.08
TRIM11Q96F44 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.55■□□□□ 0.08
TRIM11Q96F44 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
TRIM11Q96F44 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
TRIM11Q96F44 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM11Q96F44 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
TRIM11Q96F44 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM11Q96F44 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM11Q96F44 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM11Q96F44 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC15.55■□□□□ 0.08
TRIM11Q96F44 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TRIM11Q96F44 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC15.55■□□□□ 0.08
TRIM11Q96F44 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM11Q96F44 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM11Q96F44 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
TRIM11Q96F44 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM11Q96F44 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC15.55■□□□□ 0.08
TRIM11Q96F44 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM11Q96F44 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
TRIM11Q96F44 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC15.55■□□□□ 0.08
TRIM11Q96F44 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM11Q96F44 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM11Q96F44 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC15.54■□□□□ 0.08
TRIM11Q96F44 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
TRIM11Q96F44 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC15.54■□□□□ 0.08
TRIM11Q96F44 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
TRIM11Q96F44 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
TRIM11Q96F44 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM11Q96F44 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM11Q96F44 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM11Q96F44 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM11Q96F44 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM11Q96F44 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM11Q96F44 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM11Q96F44 AC064801.2-201ENST00000625052 1303 ntBASIC15.54■□□□□ 0.08
TRIM11Q96F44 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM11Q96F44 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC15.54■□□□□ 0.08
TRIM11Q96F44 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM11Q96F44 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM11Q96F44 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
TRIM11Q96F44 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM11Q96F44 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.54■□□□□ 0.08
TRIM11Q96F44 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM11Q96F44 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.54■□□□□ 0.08
TRIM11Q96F44 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM11Q96F44 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC15.54■□□□□ 0.08
TRIM11Q96F44 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC15.54■□□□□ 0.08
TRIM11Q96F44 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM11Q96F44 AL590640.2-201ENST00000457038 527 ntBASIC15.54■□□□□ 0.08
TRIM11Q96F44 RN7SL692P-201ENST00000464677 288 ntBASIC15.54■□□□□ 0.08
TRIM11Q96F44 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.54■□□□□ 0.08
TRIM11Q96F44 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.54■□□□□ 0.08
TRIM11Q96F44 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.54■□□□□ 0.08
TRIM11Q96F44 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.54■□□□□ 0.08
TRIM11Q96F44 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC15.54■□□□□ 0.08
TRIM11Q96F44 AC008735.3-201ENST00000596646 500 ntBASIC15.54■□□□□ 0.08
TRIM11Q96F44 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
TRIM11Q96F44 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.54■□□□□ 0.08
TRIM11Q96F44 AC006453.4-201ENST00000636949 1252 ntBASIC15.54■□□□□ 0.08
TRIM11Q96F44 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
TRIM11Q96F44 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
TRIM11Q96F44 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM11Q96F44 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
TRIM11Q96F44 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM11Q96F44 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM11Q96F44 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM11Q96F44 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms