Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
DNAAF1Q8NEP3 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
DNAAF1Q8NEP3 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.02□□□□□ -0.33
DNAAF1Q8NEP3 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC13.02□□□□□ -0.33
DNAAF1Q8NEP3 METTL21AP1-201ENST00000438852 635 ntBASIC13.02□□□□□ -0.33
DNAAF1Q8NEP3 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.02□□□□□ -0.33
DNAAF1Q8NEP3 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.02□□□□□ -0.33
DNAAF1Q8NEP3 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.02□□□□□ -0.33
DNAAF1Q8NEP3 RN7SL399P-201ENST00000471648 279 ntBASIC13.02□□□□□ -0.33
DNAAF1Q8NEP3 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
DNAAF1Q8NEP3 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13.02□□□□□ -0.33
DNAAF1Q8NEP3 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.02□□□□□ -0.33
DNAAF1Q8NEP3 STOM-203ENST00000538954 1257 ntTSL 5 BASIC13.02□□□□□ -0.33
DNAAF1Q8NEP3 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
DNAAF1Q8NEP3 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.02□□□□□ -0.33
DNAAF1Q8NEP3 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC13.02□□□□□ -0.33
DNAAF1Q8NEP3 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
DNAAF1Q8NEP3 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC13.02□□□□□ -0.33
DNAAF1Q8NEP3 AC107373.2-201ENST00000607735 490 ntBASIC13.02□□□□□ -0.33
DNAAF1Q8NEP3 AC008738.7-201ENST00000609744 511 ntBASIC13.02□□□□□ -0.33
DNAAF1Q8NEP3 AC004840.1-201ENST00000636359 365 ntBASIC13.02□□□□□ -0.33
DNAAF1Q8NEP3 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC13.02□□□□□ -0.33
DNAAF1Q8NEP3 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13.02□□□□□ -0.33
DNAAF1Q8NEP3 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
DNAAF1Q8NEP3 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
DNAAF1Q8NEP3 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC13.02□□□□□ -0.33
DNAAF1Q8NEP3 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
DNAAF1Q8NEP3 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
DNAAF1Q8NEP3 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC13.02□□□□□ -0.33
DNAAF1Q8NEP3 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
DNAAF1Q8NEP3 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
DNAAF1Q8NEP3 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
DNAAF1Q8NEP3 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
DNAAF1Q8NEP3 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
DNAAF1Q8NEP3 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
DNAAF1Q8NEP3 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.02□□□□□ -0.33
DNAAF1Q8NEP3 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
DNAAF1Q8NEP3 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
DNAAF1Q8NEP3 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
DNAAF1Q8NEP3 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC13.01□□□□□ -0.33
DNAAF1Q8NEP3 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
DNAAF1Q8NEP3 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
DNAAF1Q8NEP3 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
DNAAF1Q8NEP3 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
DNAAF1Q8NEP3 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
DNAAF1Q8NEP3 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
DNAAF1Q8NEP3 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
DNAAF1Q8NEP3 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC13.01□□□□□ -0.33
DNAAF1Q8NEP3 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
DNAAF1Q8NEP3 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
DNAAF1Q8NEP3 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
DNAAF1Q8NEP3 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
DNAAF1Q8NEP3 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
DNAAF1Q8NEP3 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
DNAAF1Q8NEP3 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.01□□□□□ -0.33
DNAAF1Q8NEP3 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
DNAAF1Q8NEP3 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
DNAAF1Q8NEP3 LBH-203ENST00000404397 543 ntTSL 4 BASIC13.01□□□□□ -0.33
DNAAF1Q8NEP3 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC13.01□□□□□ -0.33
DNAAF1Q8NEP3 AL589987.1-201ENST00000453380 819 ntBASIC13.01□□□□□ -0.33
DNAAF1Q8NEP3 AL512638.1-201ENST00000457493 794 ntBASIC13.01□□□□□ -0.33
DNAAF1Q8NEP3 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
DNAAF1Q8NEP3 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.01□□□□□ -0.33
DNAAF1Q8NEP3 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
DNAAF1Q8NEP3 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC13.01□□□□□ -0.33
DNAAF1Q8NEP3 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.01□□□□□ -0.33
DNAAF1Q8NEP3 AL049840.4-201ENST00000602422 811 ntBASIC13.01□□□□□ -0.33
DNAAF1Q8NEP3 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC13.01□□□□□ -0.33
DNAAF1Q8NEP3 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
DNAAF1Q8NEP3 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
DNAAF1Q8NEP3 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
DNAAF1Q8NEP3 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
DNAAF1Q8NEP3 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
DNAAF1Q8NEP3 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
DNAAF1Q8NEP3 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
DNAAF1Q8NEP3 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
DNAAF1Q8NEP3 KRT8P24-201ENST00000560290 1559 ntBASIC13.01□□□□□ -0.33
DNAAF1Q8NEP3 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
DNAAF1Q8NEP3 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
DNAAF1Q8NEP3 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
DNAAF1Q8NEP3 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
DNAAF1Q8NEP3 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
DNAAF1Q8NEP3 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
DNAAF1Q8NEP3 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC13.01□□□□□ -0.33
DNAAF1Q8NEP3 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
DNAAF1Q8NEP3 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.01□□□□□ -0.33
DNAAF1Q8NEP3 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
DNAAF1Q8NEP3 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC13.01□□□□□ -0.33
DNAAF1Q8NEP3 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC13.01□□□□□ -0.33
DNAAF1Q8NEP3 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
DNAAF1Q8NEP3 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
DNAAF1Q8NEP3 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
DNAAF1Q8NEP3 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
DNAAF1Q8NEP3 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
DNAAF1Q8NEP3 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
DNAAF1Q8NEP3 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
DNAAF1Q8NEP3 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
DNAAF1Q8NEP3 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
DNAAF1Q8NEP3 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13□□□□□ -0.33
DNAAF1Q8NEP3 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms