Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CPEB3Q8NE35 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CPEB3Q8NE35 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CPEB3Q8NE35 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
CPEB3Q8NE35 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
CPEB3Q8NE35 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
CPEB3Q8NE35 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CPEB3Q8NE35 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CPEB3Q8NE35 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CPEB3Q8NE35 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC12.9□□□□□ -0.34
CPEB3Q8NE35 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
CPEB3Q8NE35 AC099336.1-201ENST00000417053 1171 ntBASIC12.9□□□□□ -0.34
CPEB3Q8NE35 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
CPEB3Q8NE35 HLA-V-201ENST00000429037 534 ntBASIC12.9□□□□□ -0.34
CPEB3Q8NE35 TPT1P11-201ENST00000458482 498 ntBASIC12.9□□□□□ -0.34
CPEB3Q8NE35 ALG3P1-201ENST00000508806 1114 ntBASIC12.9□□□□□ -0.34
CPEB3Q8NE35 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CPEB3Q8NE35 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CPEB3Q8NE35 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC12.9□□□□□ -0.34
CPEB3Q8NE35 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC12.9□□□□□ -0.34
CPEB3Q8NE35 HNRNPA1P48-202ENST00000565308 961 ntBASIC12.9□□□□□ -0.34
CPEB3Q8NE35 PPY2P-201ENST00000582808 702 ntBASIC12.9□□□□□ -0.34
CPEB3Q8NE35 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CPEB3Q8NE35 IFT20-216ENST00000588477 774 ntTSL 5 BASIC12.9□□□□□ -0.34
CPEB3Q8NE35 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC12.9□□□□□ -0.34
CPEB3Q8NE35 AL358472.3-201ENST00000608147 415 ntBASIC12.9□□□□□ -0.34
CPEB3Q8NE35 COX11-210ENST00000639671 696 ntBASIC12.9□□□□□ -0.34
CPEB3Q8NE35 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CPEB3Q8NE35 AC015688.4-201ENST00000580780 1647 ntBASIC12.9□□□□□ -0.34
CPEB3Q8NE35 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CPEB3Q8NE35 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CPEB3Q8NE35 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
CPEB3Q8NE35 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC12.9□□□□□ -0.34
CPEB3Q8NE35 AC006504.5-208ENST00000588784 2401 ntBASIC12.9□□□□□ -0.34
CPEB3Q8NE35 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CPEB3Q8NE35 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CPEB3Q8NE35 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CPEB3Q8NE35 BX640514.1-201ENST00000583223 1918 ntBASIC12.9□□□□□ -0.35
CPEB3Q8NE35 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC12.9□□□□□ -0.35
CPEB3Q8NE35 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
CPEB3Q8NE35 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC12.9□□□□□ -0.35
CPEB3Q8NE35 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CPEB3Q8NE35 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
CPEB3Q8NE35 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CPEB3Q8NE35 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CPEB3Q8NE35 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CPEB3Q8NE35 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CPEB3Q8NE35 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC12.89□□□□□ -0.35
CPEB3Q8NE35 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CPEB3Q8NE35 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
CPEB3Q8NE35 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CPEB3Q8NE35 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC12.89□□□□□ -0.35
CPEB3Q8NE35 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
CPEB3Q8NE35 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
CPEB3Q8NE35 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC12.89□□□□□ -0.35
CPEB3Q8NE35 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CPEB3Q8NE35 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CPEB3Q8NE35 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CPEB3Q8NE35 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CPEB3Q8NE35 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
CPEB3Q8NE35 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CPEB3Q8NE35 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CPEB3Q8NE35 TPO-206ENST00000382269 1155 ntTSL 5 BASIC12.89□□□□□ -0.35
CPEB3Q8NE35 MIR658-201ENST00000385210 100 ntBASIC12.89□□□□□ -0.35
CPEB3Q8NE35 STX1A-203ENST00000395155 783 ntTSL 2 BASIC12.89□□□□□ -0.35
CPEB3Q8NE35 AL136309.1-201ENST00000403917 691 ntBASIC12.89□□□□□ -0.35
CPEB3Q8NE35 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC12.89□□□□□ -0.35
CPEB3Q8NE35 PUDPP3-201ENST00000445368 636 ntBASIC12.89□□□□□ -0.35
CPEB3Q8NE35 CHMP1AP1-201ENST00000445563 662 ntBASIC12.89□□□□□ -0.35
CPEB3Q8NE35 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CPEB3Q8NE35 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC12.89□□□□□ -0.35
CPEB3Q8NE35 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC12.89□□□□□ -0.35
CPEB3Q8NE35 NOP2-220ENST00000545915 630 ntTSL 2 BASIC12.89□□□□□ -0.35
CPEB3Q8NE35 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CPEB3Q8NE35 AP006547.1-201ENST00000563435 692 ntBASIC12.89□□□□□ -0.35
CPEB3Q8NE35 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC12.89□□□□□ -0.35
CPEB3Q8NE35 ZACNP1-201ENST00000612259 710 ntBASIC12.89□□□□□ -0.35
CPEB3Q8NE35 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CPEB3Q8NE35 AP001002.3-201ENST00000623482 206 ntBASIC12.89□□□□□ -0.35
CPEB3Q8NE35 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC12.89□□□□□ -0.35
CPEB3Q8NE35 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC12.89□□□□□ -0.35
CPEB3Q8NE35 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CPEB3Q8NE35 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CPEB3Q8NE35 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CPEB3Q8NE35 MVK-214ENST00000629016 1591 ntTSL 5 BASIC12.89□□□□□ -0.35
CPEB3Q8NE35 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CPEB3Q8NE35 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CPEB3Q8NE35 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CPEB3Q8NE35 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CPEB3Q8NE35 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CPEB3Q8NE35 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC12.89□□□□□ -0.35
CPEB3Q8NE35 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC12.89□□□□□ -0.35
CPEB3Q8NE35 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CPEB3Q8NE35 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CPEB3Q8NE35 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC12.88□□□□□ -0.35
CPEB3Q8NE35 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CPEB3Q8NE35 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CPEB3Q8NE35 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CPEB3Q8NE35 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC12.88□□□□□ -0.35
CPEB3Q8NE35 AC015802.1-201ENST00000588104 1449 ntBASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms