Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC12.24□□□□□ -0.45
ZNF439Q8NDP4 POM121L8P-201ENST00000417732 1281 ntBASIC12.24□□□□□ -0.45
ZNF439Q8NDP4 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC12.24□□□□□ -0.45
ZNF439Q8NDP4 AC245100.3-201ENST00000441281 285 ntBASIC12.24□□□□□ -0.45
ZNF439Q8NDP4 POM121L9P-203ENST00000441984 1285 ntBASIC12.24□□□□□ -0.45
ZNF439Q8NDP4 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC12.24□□□□□ -0.45
ZNF439Q8NDP4 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC12.24□□□□□ -0.45
ZNF439Q8NDP4 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC12.24□□□□□ -0.45
ZNF439Q8NDP4 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ZNF439Q8NDP4 AGGF1P1-201ENST00000509500 2073 ntBASIC12.24□□□□□ -0.45
ZNF439Q8NDP4 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
ZNF439Q8NDP4 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
ZNF439Q8NDP4 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
ZNF439Q8NDP4 TDH-203ENST00000531764 1110 ntBASIC12.24□□□□□ -0.45
ZNF439Q8NDP4 AC131206.1-201ENST00000538078 1211 ntBASIC12.24□□□□□ -0.45
ZNF439Q8NDP4 AC145423.3-201ENST00000615987 467 ntBASIC12.24□□□□□ -0.45
ZNF439Q8NDP4 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ZNF439Q8NDP4 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ZNF439Q8NDP4 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ZNF439Q8NDP4 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ZNF439Q8NDP4 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
ZNF439Q8NDP4 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ZNF439Q8NDP4 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC12.24□□□□□ -0.45
ZNF439Q8NDP4 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC12.24□□□□□ -0.45
ZNF439Q8NDP4 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC12.23□□□□□ -0.45
ZNF439Q8NDP4 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ZNF439Q8NDP4 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC12.23□□□□□ -0.45
ZNF439Q8NDP4 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC12.23□□□□□ -0.45
ZNF439Q8NDP4 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC12.23□□□□□ -0.45
ZNF439Q8NDP4 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC12.23□□□□□ -0.45
ZNF439Q8NDP4 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ZNF439Q8NDP4 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
ZNF439Q8NDP4 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ZNF439Q8NDP4 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ZNF439Q8NDP4 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC12.23□□□□□ -0.45
ZNF439Q8NDP4 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC12.23□□□□□ -0.45
ZNF439Q8NDP4 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ZNF439Q8NDP4 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
ZNF439Q8NDP4 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ZNF439Q8NDP4 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
ZNF439Q8NDP4 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
ZNF439Q8NDP4 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ZNF439Q8NDP4 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ZNF439Q8NDP4 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ZNF439Q8NDP4 AC098614.1-201ENST00000368528 745 ntBASIC12.23□□□□□ -0.45
ZNF439Q8NDP4 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ZNF439Q8NDP4 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC12.23□□□□□ -0.45
ZNF439Q8NDP4 PNKD-204ENST00000436005 978 ntTSL 5 BASIC12.23□□□□□ -0.45
ZNF439Q8NDP4 MESTP3-201ENST00000503460 968 ntBASIC12.23□□□□□ -0.45
ZNF439Q8NDP4 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC12.23□□□□□ -0.45
ZNF439Q8NDP4 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC12.23□□□□□ -0.45
ZNF439Q8NDP4 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC12.23□□□□□ -0.45
ZNF439Q8NDP4 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC12.23□□□□□ -0.45
ZNF439Q8NDP4 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ZNF439Q8NDP4 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC12.23□□□□□ -0.45
ZNF439Q8NDP4 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC12.23□□□□□ -0.45
ZNF439Q8NDP4 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ZNF439Q8NDP4 AC025048.6-201ENST00000634326 1161 ntBASIC12.23□□□□□ -0.45
ZNF439Q8NDP4 CACNA1C-209ENST00000399603 7377 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
ZNF439Q8NDP4 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ZNF439Q8NDP4 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ZNF439Q8NDP4 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
ZNF439Q8NDP4 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ZNF439Q8NDP4 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ZNF439Q8NDP4 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC12.23□□□□□ -0.45
ZNF439Q8NDP4 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ZNF439Q8NDP4 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ZNF439Q8NDP4 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ZNF439Q8NDP4 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
ZNF439Q8NDP4 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
ZNF439Q8NDP4 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ZNF439Q8NDP4 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
ZNF439Q8NDP4 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ZNF439Q8NDP4 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ZNF439Q8NDP4 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ZNF439Q8NDP4 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ZNF439Q8NDP4 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
ZNF439Q8NDP4 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ZNF439Q8NDP4 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC12.23□□□□□ -0.45
ZNF439Q8NDP4 SLC4A5-206ENST00000423644 6185 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
ZNF439Q8NDP4 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
ZNF439Q8NDP4 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ZNF439Q8NDP4 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ZNF439Q8NDP4 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
ZNF439Q8NDP4 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ZNF439Q8NDP4 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
ZNF439Q8NDP4 AC117489.1-201ENST00000625169 3217 ntBASIC12.22□□□□□ -0.45
ZNF439Q8NDP4 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ZNF439Q8NDP4 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ZNF439Q8NDP4 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC12.22□□□□□ -0.45
ZNF439Q8NDP4 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ZNF439Q8NDP4 MVK-214ENST00000629016 1591 ntTSL 5 BASIC12.22□□□□□ -0.45
ZNF439Q8NDP4 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ZNF439Q8NDP4 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
ZNF439Q8NDP4 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ZNF439Q8NDP4 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC12.22□□□□□ -0.45
ZNF439Q8NDP4 USP28-214ENST00000545540 3431 ntTSL 2 BASIC12.22□□□□□ -0.45
ZNF439Q8NDP4 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
ZNF439Q8NDP4 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ZNF439Q8NDP4 CLUHP2-201ENST00000426660 1303 ntBASIC12.22□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms