Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 SCARNA21-201ENST00000517026 139 ntBASIC12.94□□□□□ -0.34
ZIC4Q8N9L1 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC12.94□□□□□ -0.34
ZIC4Q8N9L1 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ZIC4Q8N9L1 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC12.94□□□□□ -0.34
ZIC4Q8N9L1 MIR4538-201ENST00000581377 78 ntBASIC12.94□□□□□ -0.34
ZIC4Q8N9L1 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ZIC4Q8N9L1 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC12.94□□□□□ -0.34
ZIC4Q8N9L1 AC104506.1-201ENST00000609247 429 ntBASIC12.94□□□□□ -0.34
ZIC4Q8N9L1 AL008638.5-201ENST00000623814 1298 ntBASIC12.94□□□□□ -0.34
ZIC4Q8N9L1 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC12.94□□□□□ -0.34
ZIC4Q8N9L1 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZIC4Q8N9L1 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZIC4Q8N9L1 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZIC4Q8N9L1 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
ZIC4Q8N9L1 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC12.94□□□□□ -0.34
ZIC4Q8N9L1 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZIC4Q8N9L1 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
ZIC4Q8N9L1 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC12.94□□□□□ -0.34
ZIC4Q8N9L1 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC12.94□□□□□ -0.34
ZIC4Q8N9L1 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
ZIC4Q8N9L1 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZIC4Q8N9L1 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ZIC4Q8N9L1 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ZIC4Q8N9L1 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZIC4Q8N9L1 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZIC4Q8N9L1 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZIC4Q8N9L1 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC12.94□□□□□ -0.34
ZIC4Q8N9L1 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZIC4Q8N9L1 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ZIC4Q8N9L1 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
ZIC4Q8N9L1 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
ZIC4Q8N9L1 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
ZIC4Q8N9L1 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ZIC4Q8N9L1 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ZIC4Q8N9L1 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC12.93□□□□□ -0.34
ZIC4Q8N9L1 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
ZIC4Q8N9L1 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ZIC4Q8N9L1 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
ZIC4Q8N9L1 AC020910.6-201ENST00000623084 1459 ntBASIC12.93□□□□□ -0.34
ZIC4Q8N9L1 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC12.93□□□□□ -0.34
ZIC4Q8N9L1 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC12.93□□□□□ -0.34
ZIC4Q8N9L1 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC12.93□□□□□ -0.34
ZIC4Q8N9L1 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ZIC4Q8N9L1 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
ZIC4Q8N9L1 FAM86MP-201ENST00000340703 885 ntBASIC12.93□□□□□ -0.34
ZIC4Q8N9L1 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
ZIC4Q8N9L1 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC12.93□□□□□ -0.34
ZIC4Q8N9L1 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC12.93□□□□□ -0.34
ZIC4Q8N9L1 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC12.93□□□□□ -0.34
ZIC4Q8N9L1 PTPA-218ENST00000435132 618 ntTSL 2 BASIC12.93□□□□□ -0.34
ZIC4Q8N9L1 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC12.93□□□□□ -0.34
ZIC4Q8N9L1 AC104073.2-201ENST00000453737 312 ntBASIC12.93□□□□□ -0.34
ZIC4Q8N9L1 PFN1P12-201ENST00000455938 534 ntBASIC12.93□□□□□ -0.34
ZIC4Q8N9L1 AC006122.1-201ENST00000493323 440 ntBASIC12.93□□□□□ -0.34
ZIC4Q8N9L1 HLA-J-204ENST00000495278 958 ntBASIC12.93□□□□□ -0.34
ZIC4Q8N9L1 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC12.93□□□□□ -0.34
ZIC4Q8N9L1 AC126915.1-201ENST00000522847 1038 ntBASIC12.93□□□□□ -0.34
ZIC4Q8N9L1 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC12.93□□□□□ -0.34
ZIC4Q8N9L1 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
ZIC4Q8N9L1 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC12.93□□□□□ -0.34
ZIC4Q8N9L1 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ZIC4Q8N9L1 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
ZIC4Q8N9L1 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC12.93□□□□□ -0.34
ZIC4Q8N9L1 AP000346.4-201ENST00000614827 381 ntBASIC12.93□□□□□ -0.34
ZIC4Q8N9L1 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
ZIC4Q8N9L1 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC12.93□□□□□ -0.34
ZIC4Q8N9L1 AC004923.1-202ENST00000642106 209 ntBASIC12.93□□□□□ -0.34
ZIC4Q8N9L1 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ZIC4Q8N9L1 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ZIC4Q8N9L1 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ZIC4Q8N9L1 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
ZIC4Q8N9L1 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC12.93□□□□□ -0.34
ZIC4Q8N9L1 HPD-204ENST00000543163 1709 ntTSL 5 BASIC12.93□□□□□ -0.34
ZIC4Q8N9L1 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ZIC4Q8N9L1 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC12.93□□□□□ -0.34
ZIC4Q8N9L1 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
ZIC4Q8N9L1 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ZIC4Q8N9L1 FAM90A7P-201ENST00000382628 1395 ntBASIC12.93□□□□□ -0.34
ZIC4Q8N9L1 FAM90A23P-201ENST00000400136 1395 ntBASIC12.93□□□□□ -0.34
ZIC4Q8N9L1 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ZIC4Q8N9L1 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ZIC4Q8N9L1 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ZIC4Q8N9L1 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC12.93□□□□□ -0.34
ZIC4Q8N9L1 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ZIC4Q8N9L1 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC12.92□□□□□ -0.34
ZIC4Q8N9L1 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ZIC4Q8N9L1 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
ZIC4Q8N9L1 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC12.92□□□□□ -0.34
ZIC4Q8N9L1 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ZIC4Q8N9L1 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
ZIC4Q8N9L1 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
ZIC4Q8N9L1 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ZIC4Q8N9L1 USP4-203ENST00000415188 1454 ntTSL 3 BASIC12.92□□□□□ -0.34
ZIC4Q8N9L1 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
ZIC4Q8N9L1 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ZIC4Q8N9L1 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC12.92□□□□□ -0.34
ZIC4Q8N9L1 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC12.92□□□□□ -0.34
ZIC4Q8N9L1 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
ZIC4Q8N9L1 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ZIC4Q8N9L1 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms