Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ARHGEF39Q8N4T4 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ARHGEF39Q8N4T4 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ARHGEF39Q8N4T4 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
ARHGEF39Q8N4T4 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ARHGEF39Q8N4T4 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13.78□□□□□ -0.2
ARHGEF39Q8N4T4 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
ARHGEF39Q8N4T4 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
ARHGEF39Q8N4T4 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ARHGEF39Q8N4T4 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ARHGEF39Q8N4T4 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.78□□□□□ -0.2
ARHGEF39Q8N4T4 AC005912.2-201ENST00000619492 2400 ntBASIC13.78□□□□□ -0.2
ARHGEF39Q8N4T4 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.78□□□□□ -0.2
ARHGEF39Q8N4T4 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.2
ARHGEF39Q8N4T4 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.77□□□□□ -0.2
ARHGEF39Q8N4T4 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.77□□□□□ -0.2
ARHGEF39Q8N4T4 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
ARHGEF39Q8N4T4 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
ARHGEF39Q8N4T4 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
ARHGEF39Q8N4T4 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.2
ARHGEF39Q8N4T4 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
ARHGEF39Q8N4T4 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ARHGEF39Q8N4T4 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
ARHGEF39Q8N4T4 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
ARHGEF39Q8N4T4 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ARHGEF39Q8N4T4 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC13.77□□□□□ -0.21
ARHGEF39Q8N4T4 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ARHGEF39Q8N4T4 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
ARHGEF39Q8N4T4 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ARHGEF39Q8N4T4 AL008707.1-201ENST00000422498 534 ntBASIC13.77□□□□□ -0.21
ARHGEF39Q8N4T4 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
ARHGEF39Q8N4T4 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
ARHGEF39Q8N4T4 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC13.77□□□□□ -0.21
ARHGEF39Q8N4T4 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
ARHGEF39Q8N4T4 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.77□□□□□ -0.21
ARHGEF39Q8N4T4 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ARHGEF39Q8N4T4 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC13.77□□□□□ -0.21
ARHGEF39Q8N4T4 CCNC-217ENST00000523985 958 ntTSL 2 BASIC13.77□□□□□ -0.21
ARHGEF39Q8N4T4 ADM-202ENST00000524948 584 ntTSL 2 BASIC13.77□□□□□ -0.21
ARHGEF39Q8N4T4 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ARHGEF39Q8N4T4 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC13.77□□□□□ -0.21
ARHGEF39Q8N4T4 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.77□□□□□ -0.21
ARHGEF39Q8N4T4 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC13.77□□□□□ -0.21
ARHGEF39Q8N4T4 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC13.77□□□□□ -0.21
ARHGEF39Q8N4T4 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC13.77□□□□□ -0.21
ARHGEF39Q8N4T4 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC13.77□□□□□ -0.21
ARHGEF39Q8N4T4 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC13.77□□□□□ -0.21
ARHGEF39Q8N4T4 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC13.77□□□□□ -0.21
ARHGEF39Q8N4T4 AC092299.1-201ENST00000632679 757 ntBASIC13.77□□□□□ -0.21
ARHGEF39Q8N4T4 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.77□□□□□ -0.21
ARHGEF39Q8N4T4 AL805961.1-203ENST00000641078 1258 ntBASIC13.77□□□□□ -0.21
ARHGEF39Q8N4T4 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
ARHGEF39Q8N4T4 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
ARHGEF39Q8N4T4 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC13.77□□□□□ -0.21
ARHGEF39Q8N4T4 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
ARHGEF39Q8N4T4 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ARHGEF39Q8N4T4 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ARHGEF39Q8N4T4 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ARHGEF39Q8N4T4 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ARHGEF39Q8N4T4 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.76□□□□□ -0.21
ARHGEF39Q8N4T4 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
ARHGEF39Q8N4T4 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ARHGEF39Q8N4T4 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.76□□□□□ -0.21
ARHGEF39Q8N4T4 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
ARHGEF39Q8N4T4 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.76□□□□□ -0.21
ARHGEF39Q8N4T4 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC13.76□□□□□ -0.21
ARHGEF39Q8N4T4 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ARHGEF39Q8N4T4 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ARHGEF39Q8N4T4 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.76□□□□□ -0.21
ARHGEF39Q8N4T4 AL133338.1-201ENST00000565695 1517 ntBASIC13.76□□□□□ -0.21
ARHGEF39Q8N4T4 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ARHGEF39Q8N4T4 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC13.76□□□□□ -0.21
ARHGEF39Q8N4T4 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ARHGEF39Q8N4T4 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
ARHGEF39Q8N4T4 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
ARHGEF39Q8N4T4 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ARHGEF39Q8N4T4 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ARHGEF39Q8N4T4 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ARHGEF39Q8N4T4 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ARHGEF39Q8N4T4 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ARHGEF39Q8N4T4 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ARHGEF39Q8N4T4 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC13.76□□□□□ -0.21
ARHGEF39Q8N4T4 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ARHGEF39Q8N4T4 CYP46A4P-201ENST00000414953 267 ntBASIC13.76□□□□□ -0.21
ARHGEF39Q8N4T4 ACTG1P2-201ENST00000415776 1125 ntBASIC13.76□□□□□ -0.21
ARHGEF39Q8N4T4 KRTAP19-9P-201ENST00000421795 191 ntBASIC13.76□□□□□ -0.21
ARHGEF39Q8N4T4 ACTG1P11-201ENST00000425411 1125 ntBASIC13.76□□□□□ -0.21
ARHGEF39Q8N4T4 AC011742.3-201ENST00000439053 820 ntBASIC13.76□□□□□ -0.21
ARHGEF39Q8N4T4 AL596276.2-201ENST00000447525 331 ntBASIC13.76□□□□□ -0.21
ARHGEF39Q8N4T4 AC005077.2-201ENST00000449786 690 ntBASIC13.76□□□□□ -0.21
ARHGEF39Q8N4T4 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ARHGEF39Q8N4T4 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC13.76□□□□□ -0.21
ARHGEF39Q8N4T4 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC13.76□□□□□ -0.21
ARHGEF39Q8N4T4 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC13.76□□□□□ -0.21
ARHGEF39Q8N4T4 RERG-205ENST00000537647 935 ntTSL 2 BASIC13.76□□□□□ -0.21
ARHGEF39Q8N4T4 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC13.76□□□□□ -0.21
ARHGEF39Q8N4T4 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
ARHGEF39Q8N4T4 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC13.76□□□□□ -0.21
ARHGEF39Q8N4T4 IGHV3OR16-16-201ENST00000563644 343 ntBASIC13.76□□□□□ -0.21
ARHGEF39Q8N4T4 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms