Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00346Q8IVM7 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC13.05□□□□□ -0.32
LINC00346Q8IVM7 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.05□□□□□ -0.32
LINC00346Q8IVM7 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.05□□□□□ -0.32
LINC00346Q8IVM7 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.05□□□□□ -0.32
LINC00346Q8IVM7 RN7SL752P-201ENST00000463779 287 ntBASIC13.05□□□□□ -0.32
LINC00346Q8IVM7 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00346Q8IVM7 MESTP3-201ENST00000503460 968 ntBASIC13.05□□□□□ -0.32
LINC00346Q8IVM7 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
LINC00346Q8IVM7 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.05□□□□□ -0.32
LINC00346Q8IVM7 COX11-202ENST00000571584 1108 ntTSL 2 BASIC13.05□□□□□ -0.32
LINC00346Q8IVM7 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
LINC00346Q8IVM7 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC13.05□□□□□ -0.32
LINC00346Q8IVM7 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.05□□□□□ -0.32
LINC00346Q8IVM7 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00346Q8IVM7 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
LINC00346Q8IVM7 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00346Q8IVM7 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00346Q8IVM7 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
LINC00346Q8IVM7 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.05□□□□□ -0.32
LINC00346Q8IVM7 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00346Q8IVM7 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00346Q8IVM7 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00346Q8IVM7 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC13.05□□□□□ -0.32
LINC00346Q8IVM7 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.05□□□□□ -0.32
LINC00346Q8IVM7 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00346Q8IVM7 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.05□□□□□ -0.32
LINC00346Q8IVM7 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00346Q8IVM7 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00346Q8IVM7 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00346Q8IVM7 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00346Q8IVM7 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00346Q8IVM7 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.05□□□□□ -0.32
LINC00346Q8IVM7 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.05□□□□□ -0.32
LINC00346Q8IVM7 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00346Q8IVM7 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.04□□□□□ -0.32
LINC00346Q8IVM7 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00346Q8IVM7 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00346Q8IVM7 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.04□□□□□ -0.32
LINC00346Q8IVM7 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.04□□□□□ -0.32
LINC00346Q8IVM7 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00346Q8IVM7 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00346Q8IVM7 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00346Q8IVM7 AC087386.2-201ENST00000623212 4637 ntBASIC13.04□□□□□ -0.32
LINC00346Q8IVM7 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00346Q8IVM7 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00346Q8IVM7 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00346Q8IVM7 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.04□□□□□ -0.32
LINC00346Q8IVM7 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
LINC00346Q8IVM7 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
LINC00346Q8IVM7 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00346Q8IVM7 AC016397.2-201ENST00000624848 1985 ntBASIC13.04□□□□□ -0.32
LINC00346Q8IVM7 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00346Q8IVM7 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00346Q8IVM7 AC104581.4-201ENST00000623126 3052 ntBASIC13.04□□□□□ -0.32
LINC00346Q8IVM7 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00346Q8IVM7 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00346Q8IVM7 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00346Q8IVM7 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00346Q8IVM7 AL355864.2-201ENST00000447420 863 ntBASIC13.04□□□□□ -0.32
LINC00346Q8IVM7 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC13.04□□□□□ -0.32
LINC00346Q8IVM7 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC13.04□□□□□ -0.32
LINC00346Q8IVM7 RN7SL837P-201ENST00000463010 287 ntBASIC13.04□□□□□ -0.32
LINC00346Q8IVM7 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
LINC00346Q8IVM7 FTLP10-202ENST00000505798 471 ntBASIC13.04□□□□□ -0.32
LINC00346Q8IVM7 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC13.04□□□□□ -0.32
LINC00346Q8IVM7 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
LINC00346Q8IVM7 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC13.04□□□□□ -0.32
LINC00346Q8IVM7 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.04□□□□□ -0.32
LINC00346Q8IVM7 ECM1P1-201ENST00000604092 1279 ntBASIC13.04□□□□□ -0.32
LINC00346Q8IVM7 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
LINC00346Q8IVM7 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00346Q8IVM7 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00346Q8IVM7 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.04□□□□□ -0.32
LINC00346Q8IVM7 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00346Q8IVM7 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00346Q8IVM7 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00346Q8IVM7 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
LINC00346Q8IVM7 AC009093.2-202ENST00000620513 2079 ntBASIC13.04□□□□□ -0.32
LINC00346Q8IVM7 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
LINC00346Q8IVM7 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00346Q8IVM7 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
LINC00346Q8IVM7 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00346Q8IVM7 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00346Q8IVM7 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00346Q8IVM7 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
LINC00346Q8IVM7 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.04□□□□□ -0.32
LINC00346Q8IVM7 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00346Q8IVM7 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
LINC00346Q8IVM7 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00346Q8IVM7 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00346Q8IVM7 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.04□□□□□ -0.32
LINC00346Q8IVM7 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00346Q8IVM7 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC13.04□□□□□ -0.32
LINC00346Q8IVM7 MST1P2-201ENST00000457982 2291 ntBASIC13.04□□□□□ -0.32
LINC00346Q8IVM7 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.04□□□□□ -0.32
LINC00346Q8IVM7 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00346Q8IVM7 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00346Q8IVM7 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00346Q8IVM7 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms