Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFX6Q8HWS3 AC009093.2-202ENST00000620513 2079 ntBASIC15.32■□□□□ 0.04
RFX6Q8HWS3 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFX6Q8HWS3 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFX6Q8HWS3 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFX6Q8HWS3 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFX6Q8HWS3 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RFX6Q8HWS3 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
RFX6Q8HWS3 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RFX6Q8HWS3 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFX6Q8HWS3 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.32■□□□□ 0.04
RFX6Q8HWS3 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
RFX6Q8HWS3 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFX6Q8HWS3 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFX6Q8HWS3 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC15.31■□□□□ 0.04
RFX6Q8HWS3 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
RFX6Q8HWS3 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFX6Q8HWS3 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
RFX6Q8HWS3 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFX6Q8HWS3 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFX6Q8HWS3 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RFX6Q8HWS3 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RFX6Q8HWS3 USP3-204ENST00000540797 5474 ntTSL 2 BASIC15.31■□□□□ 0.04
RFX6Q8HWS3 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFX6Q8HWS3 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFX6Q8HWS3 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFX6Q8HWS3 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFX6Q8HWS3 GUK1-206ENST00000366723 845 ntTSL 5 BASIC15.31■□□□□ 0.04
RFX6Q8HWS3 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFX6Q8HWS3 RN7SKP175-201ENST00000408472 289 ntBASIC15.31■□□□□ 0.04
RFX6Q8HWS3 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.31■□□□□ 0.04
RFX6Q8HWS3 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFX6Q8HWS3 C2orf27AP3-201ENST00000434123 579 ntBASIC15.31■□□□□ 0.04
RFX6Q8HWS3 RN7SL692P-201ENST00000464677 288 ntBASIC15.31■□□□□ 0.04
RFX6Q8HWS3 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.31■□□□□ 0.04
RFX6Q8HWS3 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.31■□□□□ 0.04
RFX6Q8HWS3 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RFX6Q8HWS3 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC15.31■□□□□ 0.04
RFX6Q8HWS3 AC103988.2-201ENST00000561804 725 ntBASIC15.31■□□□□ 0.04
RFX6Q8HWS3 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC15.31■□□□□ 0.04
RFX6Q8HWS3 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RFX6Q8HWS3 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC15.31■□□□□ 0.04
RFX6Q8HWS3 AL354718.3-201ENST00000616414 581 ntBASIC15.31■□□□□ 0.04
RFX6Q8HWS3 AP001002.3-201ENST00000623482 206 ntBASIC15.31■□□□□ 0.04
RFX6Q8HWS3 AC132938.4-201ENST00000623835 848 ntBASIC15.31■□□□□ 0.04
RFX6Q8HWS3 CR382287.1-201ENST00000623954 586 ntBASIC15.31■□□□□ 0.04
RFX6Q8HWS3 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC15.31■□□□□ 0.04
RFX6Q8HWS3 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFX6Q8HWS3 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RFX6Q8HWS3 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
RFX6Q8HWS3 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RFX6Q8HWS3 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFX6Q8HWS3 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RFX6Q8HWS3 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFX6Q8HWS3 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC15.31■□□□□ 0.04
RFX6Q8HWS3 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.31■□□□□ 0.04
RFX6Q8HWS3 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
RFX6Q8HWS3 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC15.31■□□□□ 0.04
RFX6Q8HWS3 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RFX6Q8HWS3 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.31■□□□□ 0.04
RFX6Q8HWS3 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFX6Q8HWS3 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RFX6Q8HWS3 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFX6Q8HWS3 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC15.31■□□□□ 0.04
RFX6Q8HWS3 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RFX6Q8HWS3 AC139712.1-201ENST00000378256 1875 ntBASIC15.31■□□□□ 0.04
RFX6Q8HWS3 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFX6Q8HWS3 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFX6Q8HWS3 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RFX6Q8HWS3 AC016397.2-201ENST00000624848 1985 ntBASIC15.31■□□□□ 0.04
RFX6Q8HWS3 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC15.31■□□□□ 0.04
RFX6Q8HWS3 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RFX6Q8HWS3 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RFX6Q8HWS3 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC15.3■□□□□ 0.04
RFX6Q8HWS3 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
RFX6Q8HWS3 AC087386.2-201ENST00000623212 4637 ntBASIC15.3■□□□□ 0.04
RFX6Q8HWS3 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RFX6Q8HWS3 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RFX6Q8HWS3 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RFX6Q8HWS3 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RFX6Q8HWS3 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RFX6Q8HWS3 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
RFX6Q8HWS3 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RFX6Q8HWS3 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RFX6Q8HWS3 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RFX6Q8HWS3 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RFX6Q8HWS3 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC15.3■□□□□ 0.04
RFX6Q8HWS3 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RFX6Q8HWS3 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC15.3■□□□□ 0.04
RFX6Q8HWS3 AC005229.1-201ENST00000392885 409 ntBASIC15.3■□□□□ 0.04
RFX6Q8HWS3 BANP-203ENST00000393207 2438 ntTSL 2 BASIC15.3■□□□□ 0.04
RFX6Q8HWS3 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RFX6Q8HWS3 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RFX6Q8HWS3 F10-203ENST00000409306 1450 ntTSL 3 BASIC15.3■□□□□ 0.04
RFX6Q8HWS3 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC15.3■□□□□ 0.04
RFX6Q8HWS3 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
RFX6Q8HWS3 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC15.3■□□□□ 0.04
RFX6Q8HWS3 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RFX6Q8HWS3 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RFX6Q8HWS3 INE1-201ENST00000456273 945 ntBASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms