Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC18.02■□□□□ 0.48
COL23A1Q86Y22 CDCA4P4-201ENST00000435216 680 ntBASIC18.02■□□□□ 0.48
COL23A1Q86Y22 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC18.02■□□□□ 0.48
COL23A1Q86Y22 AC113935.1-201ENST00000471722 555 ntBASIC18.02■□□□□ 0.48
COL23A1Q86Y22 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC18.02■□□□□ 0.48
COL23A1Q86Y22 AC087203.1-201ENST00000532111 1181 ntBASIC18.02■□□□□ 0.48
COL23A1Q86Y22 MIR4265-201ENST00000582152 99 ntBASIC18.02■□□□□ 0.48
COL23A1Q86Y22 AC138761.6-201ENST00000583997 1423 ntBASIC18.02■□□□□ 0.48
COL23A1Q86Y22 AC005274.1-201ENST00000623460 802 ntBASIC18.02■□□□□ 0.48
COL23A1Q86Y22 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
COL23A1Q86Y22 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.02■□□□□ 0.48
COL23A1Q86Y22 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
COL23A1Q86Y22 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC18.02■□□□□ 0.47
COL23A1Q86Y22 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
COL23A1Q86Y22 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
COL23A1Q86Y22 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.47
COL23A1Q86Y22 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
COL23A1Q86Y22 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
COL23A1Q86Y22 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
COL23A1Q86Y22 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
COL23A1Q86Y22 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL23A1Q86Y22 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC18.01■□□□□ 0.47
COL23A1Q86Y22 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COL23A1Q86Y22 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL23A1Q86Y22 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COL23A1Q86Y22 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL23A1Q86Y22 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COL23A1Q86Y22 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COL23A1Q86Y22 AL157823.1-201ENST00000403727 628 ntBASIC18.01■□□□□ 0.47
COL23A1Q86Y22 AP000244.1-201ENST00000424582 201 ntBASIC18.01■□□□□ 0.47
COL23A1Q86Y22 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COL23A1Q86Y22 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC18.01■□□□□ 0.47
COL23A1Q86Y22 ARPP19-206ENST00000564163 718 ntTSL 2 BASIC18.01■□□□□ 0.47
COL23A1Q86Y22 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COL23A1Q86Y22 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC18.01■□□□□ 0.47
COL23A1Q86Y22 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC18.01■□□□□ 0.47
COL23A1Q86Y22 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC18.01■□□□□ 0.47
COL23A1Q86Y22 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC18.01■□□□□ 0.47
COL23A1Q86Y22 CR392039.1-201ENST00000623217 204 ntBASIC18.01■□□□□ 0.47
COL23A1Q86Y22 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
COL23A1Q86Y22 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL23A1Q86Y22 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC18.01■□□□□ 0.47
COL23A1Q86Y22 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL23A1Q86Y22 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC18.01■□□□□ 0.47
COL23A1Q86Y22 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL23A1Q86Y22 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
COL23A1Q86Y22 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL23A1Q86Y22 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC18.01■□□□□ 0.47
COL23A1Q86Y22 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
COL23A1Q86Y22 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL23A1Q86Y22 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL23A1Q86Y22 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL23A1Q86Y22 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
COL23A1Q86Y22 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC18.01■□□□□ 0.47
COL23A1Q86Y22 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL23A1Q86Y22 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COL23A1Q86Y22 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC18.01■□□□□ 0.47
COL23A1Q86Y22 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
COL23A1Q86Y22 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC18.01■□□□□ 0.47
COL23A1Q86Y22 AL162727.3-201ENST00000635661 2787 ntBASIC18.01■□□□□ 0.47
COL23A1Q86Y22 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL23A1Q86Y22 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
COL23A1Q86Y22 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
COL23A1Q86Y22 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
COL23A1Q86Y22 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COL23A1Q86Y22 AC008536.3-201ENST00000623282 1599 ntBASIC18■□□□□ 0.47
COL23A1Q86Y22 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC18■□□□□ 0.47
COL23A1Q86Y22 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COL23A1Q86Y22 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COL23A1Q86Y22 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
COL23A1Q86Y22 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC18■□□□□ 0.47
COL23A1Q86Y22 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COL23A1Q86Y22 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC18■□□□□ 0.47
COL23A1Q86Y22 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC18■□□□□ 0.47
COL23A1Q86Y22 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC18■□□□□ 0.47
COL23A1Q86Y22 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC18■□□□□ 0.47
COL23A1Q86Y22 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COL23A1Q86Y22 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COL23A1Q86Y22 AQP7-202ENST00000377425 1068 ntTSL 1 (best) BASIC18■□□□□ 0.47
COL23A1Q86Y22 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC18■□□□□ 0.47
COL23A1Q86Y22 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COL23A1Q86Y22 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC18■□□□□ 0.47
COL23A1Q86Y22 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
COL23A1Q86Y22 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC18■□□□□ 0.47
COL23A1Q86Y22 AC092573.1-201ENST00000433054 884 ntBASIC18■□□□□ 0.47
COL23A1Q86Y22 GOLGA6L16P-201ENST00000441780 1299 ntBASIC18■□□□□ 0.47
COL23A1Q86Y22 HIST1H2APS2-201ENST00000454426 370 ntBASIC18■□□□□ 0.47
COL23A1Q86Y22 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC18■□□□□ 0.47
COL23A1Q86Y22 AC025186.1-201ENST00000478174 870 ntBASIC18■□□□□ 0.47
COL23A1Q86Y22 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC18■□□□□ 0.47
COL23A1Q86Y22 AC100858.1-201ENST00000514059 1228 ntBASIC18■□□□□ 0.47
COL23A1Q86Y22 FXYD6-208ENST00000529335 708 ntTSL 3 BASIC18■□□□□ 0.47
COL23A1Q86Y22 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
COL23A1Q86Y22 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC18■□□□□ 0.47
COL23A1Q86Y22 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC18■□□□□ 0.47
COL23A1Q86Y22 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC18■□□□□ 0.47
COL23A1Q86Y22 AC023389.1-201ENST00000577846 576 ntTSL 4 BASIC18■□□□□ 0.47
COL23A1Q86Y22 HPX-213ENST00000615166 826 ntTSL 5 BASIC18■□□□□ 0.47
COL23A1Q86Y22 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COL23A1Q86Y22 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms