Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM50Q86XT4 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC16.35■□□□□ 0.21
TRIM50Q86XT4 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM50Q86XT4 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM50Q86XT4 AC139712.1-201ENST00000378256 1875 ntBASIC16.35■□□□□ 0.21
TRIM50Q86XT4 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM50Q86XT4 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TRIM50Q86XT4 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC16.35■□□□□ 0.21
TRIM50Q86XT4 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC16.35■□□□□ 0.21
TRIM50Q86XT4 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.35■□□□□ 0.21
TRIM50Q86XT4 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM50Q86XT4 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
TRIM50Q86XT4 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM50Q86XT4 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
TRIM50Q86XT4 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.35■□□□□ 0.21
TRIM50Q86XT4 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM50Q86XT4 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM50Q86XT4 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM50Q86XT4 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM50Q86XT4 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM50Q86XT4 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
TRIM50Q86XT4 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TRIM50Q86XT4 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM50Q86XT4 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM50Q86XT4 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.34■□□□□ 0.21
TRIM50Q86XT4 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC16.34■□□□□ 0.21
TRIM50Q86XT4 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC16.34■□□□□ 0.21
TRIM50Q86XT4 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM50Q86XT4 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM50Q86XT4 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
TRIM50Q86XT4 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC16.34■□□□□ 0.21
TRIM50Q86XT4 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC16.34■□□□□ 0.21
TRIM50Q86XT4 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC16.34■□□□□ 0.21
TRIM50Q86XT4 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
TRIM50Q86XT4 NIFKP4-201ENST00000567275 1192 ntBASIC16.34■□□□□ 0.21
TRIM50Q86XT4 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC16.34■□□□□ 0.21
TRIM50Q86XT4 AL109837.1-201ENST00000603272 613 ntBASIC16.34■□□□□ 0.21
TRIM50Q86XT4 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC16.34■□□□□ 0.21
TRIM50Q86XT4 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
TRIM50Q86XT4 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM50Q86XT4 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC16.34■□□□□ 0.21
TRIM50Q86XT4 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM50Q86XT4 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
TRIM50Q86XT4 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM50Q86XT4 AC018442.1-201ENST00000421439 2061 ntBASIC16.34■□□□□ 0.21
TRIM50Q86XT4 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM50Q86XT4 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
TRIM50Q86XT4 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC16.34■□□□□ 0.21
TRIM50Q86XT4 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM50Q86XT4 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
TRIM50Q86XT4 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.34■□□□□ 0.21
TRIM50Q86XT4 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC16.34■□□□□ 0.21
TRIM50Q86XT4 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC16.33■□□□□ 0.21
TRIM50Q86XT4 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
TRIM50Q86XT4 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRIM50Q86XT4 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
TRIM50Q86XT4 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
TRIM50Q86XT4 AC097376.2-205ENST00000610159 5334 ntBASIC16.33■□□□□ 0.21
TRIM50Q86XT4 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRIM50Q86XT4 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRIM50Q86XT4 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.21
TRIM50Q86XT4 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRIM50Q86XT4 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
TRIM50Q86XT4 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM50Q86XT4 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.33■□□□□ 0.2
TRIM50Q86XT4 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM50Q86XT4 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM50Q86XT4 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM50Q86XT4 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM50Q86XT4 MIR33B-201ENST00000385104 96 ntBASIC16.33■□□□□ 0.2
TRIM50Q86XT4 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM50Q86XT4 MPV17-204ENST00000399052 749 ntTSL 4 BASIC16.33■□□□□ 0.2
TRIM50Q86XT4 AL353637.1-201ENST00000451571 732 ntBASIC16.33■□□□□ 0.2
TRIM50Q86XT4 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC16.33■□□□□ 0.2
TRIM50Q86XT4 CFL1-214ENST00000534769 758 ntTSL 2 BASIC16.33■□□□□ 0.2
TRIM50Q86XT4 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC16.33■□□□□ 0.2
TRIM50Q86XT4 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC16.33■□□□□ 0.2
TRIM50Q86XT4 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM50Q86XT4 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM50Q86XT4 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM50Q86XT4 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM50Q86XT4 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM50Q86XT4 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM50Q86XT4 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM50Q86XT4 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM50Q86XT4 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM50Q86XT4 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC16.33■□□□□ 0.2
TRIM50Q86XT4 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
TRIM50Q86XT4 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM50Q86XT4 LINC01165-201ENST00000445190 1623 ntBASIC16.33■□□□□ 0.2
TRIM50Q86XT4 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC16.33■□□□□ 0.2
TRIM50Q86XT4 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM50Q86XT4 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM50Q86XT4 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM50Q86XT4 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC16.33■□□□□ 0.2
TRIM50Q86XT4 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM50Q86XT4 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM50Q86XT4 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
TRIM50Q86XT4 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16.32■□□□□ 0.2
TRIM50Q86XT4 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms