Protein–RNA interactions for Protein: Q6XYD6

BRD3OS, BRD3 opposite strand, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3OSQ6XYD6 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
BRD3OSQ6XYD6 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC11.89□□□□□ -0.51
BRD3OSQ6XYD6 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
BRD3OSQ6XYD6 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
BRD3OSQ6XYD6 TMBIM7P-202ENST00000641474 1516 ntBASIC11.89□□□□□ -0.51
BRD3OSQ6XYD6 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
BRD3OSQ6XYD6 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
BRD3OSQ6XYD6 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
BRD3OSQ6XYD6 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
BRD3OSQ6XYD6 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
BRD3OSQ6XYD6 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC11.89□□□□□ -0.51
BRD3OSQ6XYD6 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC11.89□□□□□ -0.51
BRD3OSQ6XYD6 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
BRD3OSQ6XYD6 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
BRD3OSQ6XYD6 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
BRD3OSQ6XYD6 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
BRD3OSQ6XYD6 KRT8P21-201ENST00000430398 1491 ntBASIC11.89□□□□□ -0.51
BRD3OSQ6XYD6 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
BRD3OSQ6XYD6 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
BRD3OSQ6XYD6 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
BRD3OSQ6XYD6 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC11.88□□□□□ -0.51
BRD3OSQ6XYD6 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC11.88□□□□□ -0.51
BRD3OSQ6XYD6 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
BRD3OSQ6XYD6 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
BRD3OSQ6XYD6 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
BRD3OSQ6XYD6 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
BRD3OSQ6XYD6 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
BRD3OSQ6XYD6 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
BRD3OSQ6XYD6 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC11.88□□□□□ -0.51
BRD3OSQ6XYD6 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
BRD3OSQ6XYD6 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
BRD3OSQ6XYD6 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
BRD3OSQ6XYD6 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
BRD3OSQ6XYD6 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
BRD3OSQ6XYD6 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
BRD3OSQ6XYD6 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
BRD3OSQ6XYD6 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
BRD3OSQ6XYD6 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC11.88□□□□□ -0.51
BRD3OSQ6XYD6 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC11.88□□□□□ -0.51
BRD3OSQ6XYD6 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
BRD3OSQ6XYD6 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC11.88□□□□□ -0.51
BRD3OSQ6XYD6 AC006335.1-201ENST00000445200 547 ntBASIC11.88□□□□□ -0.51
BRD3OSQ6XYD6 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
BRD3OSQ6XYD6 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC11.88□□□□□ -0.51
BRD3OSQ6XYD6 IGLV3-15-201ENST00000518356 244 ntBASIC11.88□□□□□ -0.51
BRD3OSQ6XYD6 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC11.88□□□□□ -0.51
BRD3OSQ6XYD6 RTN3P1-201ENST00000536295 711 ntBASIC11.88□□□□□ -0.51
BRD3OSQ6XYD6 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC11.88□□□□□ -0.51
BRD3OSQ6XYD6 MIR3907-201ENST00000579424 151 ntBASIC11.88□□□□□ -0.51
BRD3OSQ6XYD6 CENPX-208ENST00000584347 799 ntTSL 2 BASIC11.88□□□□□ -0.51
BRD3OSQ6XYD6 AL133499.1-201ENST00000596207 608 ntBASIC11.88□□□□□ -0.51
BRD3OSQ6XYD6 IRF3-215ENST00000596822 823 ntTSL 3 BASIC11.88□□□□□ -0.51
BRD3OSQ6XYD6 AC012044.1-201ENST00000603431 297 ntBASIC11.88□□□□□ -0.51
BRD3OSQ6XYD6 AF254983.2-201ENST00000612331 135 ntBASIC11.88□□□□□ -0.51
BRD3OSQ6XYD6 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
BRD3OSQ6XYD6 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
BRD3OSQ6XYD6 INTS4P1-203ENST00000641008 3683 ntBASIC11.88□□□□□ -0.51
BRD3OSQ6XYD6 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
BRD3OSQ6XYD6 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
BRD3OSQ6XYD6 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
BRD3OSQ6XYD6 AC015688.4-201ENST00000580780 1647 ntBASIC11.88□□□□□ -0.51
BRD3OSQ6XYD6 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
BRD3OSQ6XYD6 AC126177.1-201ENST00000547829 2218 ntBASIC11.88□□□□□ -0.51
BRD3OSQ6XYD6 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
BRD3OSQ6XYD6 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
BRD3OSQ6XYD6 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
BRD3OSQ6XYD6 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC11.88□□□□□ -0.51
BRD3OSQ6XYD6 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
BRD3OSQ6XYD6 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
BRD3OSQ6XYD6 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC11.88□□□□□ -0.51
BRD3OSQ6XYD6 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
BRD3OSQ6XYD6 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
BRD3OSQ6XYD6 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC11.88□□□□□ -0.51
BRD3OSQ6XYD6 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
BRD3OSQ6XYD6 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
BRD3OSQ6XYD6 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC11.88□□□□□ -0.51
BRD3OSQ6XYD6 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC11.88□□□□□ -0.51
BRD3OSQ6XYD6 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
BRD3OSQ6XYD6 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
BRD3OSQ6XYD6 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
BRD3OSQ6XYD6 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
BRD3OSQ6XYD6 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
BRD3OSQ6XYD6 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
BRD3OSQ6XYD6 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
BRD3OSQ6XYD6 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
BRD3OSQ6XYD6 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
BRD3OSQ6XYD6 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
BRD3OSQ6XYD6 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
BRD3OSQ6XYD6 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
BRD3OSQ6XYD6 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
BRD3OSQ6XYD6 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
BRD3OSQ6XYD6 USP35-204ENST00000530267 2419 ntTSL 2 BASIC11.87□□□□□ -0.51
BRD3OSQ6XYD6 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
BRD3OSQ6XYD6 AC018442.1-201ENST00000421439 2061 ntBASIC11.87□□□□□ -0.51
BRD3OSQ6XYD6 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
BRD3OSQ6XYD6 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
BRD3OSQ6XYD6 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
BRD3OSQ6XYD6 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
BRD3OSQ6XYD6 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
BRD3OSQ6XYD6 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 170.5 ms