Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFX7Q2KHR2 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC17.57■□□□□ 0.4
RFX7Q2KHR2 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
RFX7Q2KHR2 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFX7Q2KHR2 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
RFX7Q2KHR2 INTS4P1-203ENST00000641008 3683 ntBASIC17.57■□□□□ 0.4
RFX7Q2KHR2 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFX7Q2KHR2 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC17.57■□□□□ 0.4
RFX7Q2KHR2 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
RFX7Q2KHR2 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFX7Q2KHR2 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC17.57■□□□□ 0.4
RFX7Q2KHR2 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFX7Q2KHR2 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RFX7Q2KHR2 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC17.57■□□□□ 0.4
RFX7Q2KHR2 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RFX7Q2KHR2 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFX7Q2KHR2 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RFX7Q2KHR2 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC17.57■□□□□ 0.4
RFX7Q2KHR2 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
RFX7Q2KHR2 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC17.57■□□□□ 0.4
RFX7Q2KHR2 TSPY26P-202ENST00000565928 3884 ntBASIC17.56■□□□□ 0.4
RFX7Q2KHR2 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RFX7Q2KHR2 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RFX7Q2KHR2 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RFX7Q2KHR2 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RFX7Q2KHR2 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
RFX7Q2KHR2 MAGEA5-201ENST00000446757 942 ntBASIC17.56■□□□□ 0.4
RFX7Q2KHR2 EEF1DP6-201ENST00000449232 372 ntBASIC17.56■□□□□ 0.4
RFX7Q2KHR2 AL353637.1-201ENST00000451571 732 ntBASIC17.56■□□□□ 0.4
RFX7Q2KHR2 AC090857.1-201ENST00000527400 390 ntBASIC17.56■□□□□ 0.4
RFX7Q2KHR2 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC17.56■□□□□ 0.4
RFX7Q2KHR2 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC17.56■□□□□ 0.4
RFX7Q2KHR2 AC003686.1-201ENST00000550956 1034 ntBASIC17.56■□□□□ 0.4
RFX7Q2KHR2 DDX5-235ENST00000630471 473 ntTSL 4 BASIC17.56■□□□□ 0.4
RFX7Q2KHR2 NAP1L6-202ENST00000641404 1222 ntBASIC17.56■□□□□ 0.4
RFX7Q2KHR2 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC17.56■□□□□ 0.4
RFX7Q2KHR2 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RFX7Q2KHR2 KRT8P21-201ENST00000430398 1491 ntBASIC17.56■□□□□ 0.4
RFX7Q2KHR2 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
RFX7Q2KHR2 AC144522.1-201ENST00000625111 1658 ntBASIC17.56■□□□□ 0.4
RFX7Q2KHR2 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
RFX7Q2KHR2 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
RFX7Q2KHR2 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RFX7Q2KHR2 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
RFX7Q2KHR2 AC012617.1-204ENST00000586340 2305 ntBASIC17.56■□□□□ 0.4
RFX7Q2KHR2 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RFX7Q2KHR2 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
RFX7Q2KHR2 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RFX7Q2KHR2 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RFX7Q2KHR2 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC17.56■□□□□ 0.4
RFX7Q2KHR2 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
RFX7Q2KHR2 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
RFX7Q2KHR2 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
RFX7Q2KHR2 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
RFX7Q2KHR2 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RFX7Q2KHR2 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
RFX7Q2KHR2 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RFX7Q2KHR2 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
RFX7Q2KHR2 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RFX7Q2KHR2 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFX7Q2KHR2 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFX7Q2KHR2 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC17.55■□□□□ 0.4
RFX7Q2KHR2 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFX7Q2KHR2 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RFX7Q2KHR2 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC17.55■□□□□ 0.4
RFX7Q2KHR2 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RFX7Q2KHR2 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC17.55■□□□□ 0.4
RFX7Q2KHR2 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC17.55■□□□□ 0.4
RFX7Q2KHR2 RPS2P36-201ENST00000456516 831 ntBASIC17.55■□□□□ 0.4
RFX7Q2KHR2 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC17.55■□□□□ 0.4
RFX7Q2KHR2 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC17.55■□□□□ 0.4
RFX7Q2KHR2 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC17.55■□□□□ 0.4
RFX7Q2KHR2 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC17.55■□□□□ 0.4
RFX7Q2KHR2 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC17.55■□□□□ 0.4
RFX7Q2KHR2 AC006453.1-201ENST00000636037 1257 ntBASIC17.55■□□□□ 0.4
RFX7Q2KHR2 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC17.55■□□□□ 0.4
RFX7Q2KHR2 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
RFX7Q2KHR2 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFX7Q2KHR2 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
RFX7Q2KHR2 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
RFX7Q2KHR2 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RFX7Q2KHR2 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFX7Q2KHR2 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
RFX7Q2KHR2 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
RFX7Q2KHR2 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC17.55■□□□□ 0.4
RFX7Q2KHR2 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFX7Q2KHR2 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC17.55■□□□□ 0.4
RFX7Q2KHR2 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
RFX7Q2KHR2 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC17.55■□□□□ 0.4
RFX7Q2KHR2 GRK6P1-201ENST00000400595 1711 ntBASIC17.55■□□□□ 0.4
RFX7Q2KHR2 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
RFX7Q2KHR2 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
RFX7Q2KHR2 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC17.54■□□□□ 0.4
RFX7Q2KHR2 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
RFX7Q2KHR2 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC17.54■□□□□ 0.4
RFX7Q2KHR2 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC17.54■□□□□ 0.4
RFX7Q2KHR2 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
RFX7Q2KHR2 OR2R1P-201ENST00000441404 914 ntBASIC17.54■□□□□ 0.4
RFX7Q2KHR2 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC17.54■□□□□ 0.4
RFX7Q2KHR2 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms