Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
SYCNQ0VAF6 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC9.79□□□□□ -0.84
SYCNQ0VAF6 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
SYCNQ0VAF6 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
SYCNQ0VAF6 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC9.79□□□□□ -0.84
SYCNQ0VAF6 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
SYCNQ0VAF6 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
SYCNQ0VAF6 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC9.79□□□□□ -0.84
SYCNQ0VAF6 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
SYCNQ0VAF6 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC9.79□□□□□ -0.84
SYCNQ0VAF6 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC9.79□□□□□ -0.84
SYCNQ0VAF6 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC9.79□□□□□ -0.84
SYCNQ0VAF6 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
SYCNQ0VAF6 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
SYCNQ0VAF6 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
SYCNQ0VAF6 MX1-218ENST00000619682 1980 ntTSL 5 BASIC9.79□□□□□ -0.84
SYCNQ0VAF6 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
SYCNQ0VAF6 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC9.79□□□□□ -0.84
SYCNQ0VAF6 AC097359.2-201ENST00000604992 2389 ntBASIC9.79□□□□□ -0.84
SYCNQ0VAF6 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC9.79□□□□□ -0.84
SYCNQ0VAF6 AC134312.5-201ENST00000568031 1313 ntBASIC9.79□□□□□ -0.84
SYCNQ0VAF6 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
SYCNQ0VAF6 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
SYCNQ0VAF6 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
SYCNQ0VAF6 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
SYCNQ0VAF6 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
SYCNQ0VAF6 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
SYCNQ0VAF6 AC003102.2-201ENST00000589195 1469 ntBASIC9.79□□□□□ -0.84
SYCNQ0VAF6 AC117489.1-201ENST00000625169 3217 ntBASIC9.78□□□□□ -0.84
SYCNQ0VAF6 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
SYCNQ0VAF6 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SYCNQ0VAF6 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
SYCNQ0VAF6 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC9.78□□□□□ -0.84
SYCNQ0VAF6 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC9.78□□□□□ -0.84
SYCNQ0VAF6 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC9.78□□□□□ -0.84
SYCNQ0VAF6 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SYCNQ0VAF6 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC9.78□□□□□ -0.84
SYCNQ0VAF6 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
SYCNQ0VAF6 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
SYCNQ0VAF6 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
SYCNQ0VAF6 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
SYCNQ0VAF6 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SYCNQ0VAF6 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC9.78□□□□□ -0.84
SYCNQ0VAF6 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
SYCNQ0VAF6 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SYCNQ0VAF6 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SYCNQ0VAF6 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
SYCNQ0VAF6 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SYCNQ0VAF6 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SYCNQ0VAF6 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SYCNQ0VAF6 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
SYCNQ0VAF6 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
SYCNQ0VAF6 AC245100.3-201ENST00000441281 285 ntBASIC9.78□□□□□ -0.84
SYCNQ0VAF6 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC9.78□□□□□ -0.84
SYCNQ0VAF6 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC9.78□□□□□ -0.84
SYCNQ0VAF6 AC011495.1-201ENST00000498085 584 ntBASIC9.78□□□□□ -0.84
SYCNQ0VAF6 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC9.78□□□□□ -0.84
SYCNQ0VAF6 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC9.78□□□□□ -0.84
SYCNQ0VAF6 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC9.78□□□□□ -0.84
SYCNQ0VAF6 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC9.78□□□□□ -0.84
SYCNQ0VAF6 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC9.78□□□□□ -0.84
SYCNQ0VAF6 COQ6-210ENST00000554920 649 ntTSL 3 BASIC9.78□□□□□ -0.84
SYCNQ0VAF6 GREM1-201ENST00000560677 623 ntTSL 4 BASIC9.78□□□□□ -0.84
SYCNQ0VAF6 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC9.78□□□□□ -0.84
SYCNQ0VAF6 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC9.78□□□□□ -0.84
SYCNQ0VAF6 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC9.78□□□□□ -0.84
SYCNQ0VAF6 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC9.78□□□□□ -0.84
SYCNQ0VAF6 AL355385.1-201ENST00000606123 409 ntBASIC9.78□□□□□ -0.84
SYCNQ0VAF6 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC9.78□□□□□ -0.84
SYCNQ0VAF6 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC9.78□□□□□ -0.84
SYCNQ0VAF6 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SYCNQ0VAF6 GRK6P1-201ENST00000400595 1711 ntBASIC9.78□□□□□ -0.84
SYCNQ0VAF6 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
SYCNQ0VAF6 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
SYCNQ0VAF6 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SYCNQ0VAF6 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
SYCNQ0VAF6 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
SYCNQ0VAF6 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
SYCNQ0VAF6 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SYCNQ0VAF6 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC9.78□□□□□ -0.84
SYCNQ0VAF6 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
SYCNQ0VAF6 MRPL37P1-201ENST00000592451 1337 ntBASIC9.78□□□□□ -0.84
SYCNQ0VAF6 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
SYCNQ0VAF6 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
SYCNQ0VAF6 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SYCNQ0VAF6 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SYCNQ0VAF6 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC9.78□□□□□ -0.84
SYCNQ0VAF6 AP001267.2-201ENST00000532619 2086 ntBASIC9.78□□□□□ -0.84
SYCNQ0VAF6 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SYCNQ0VAF6 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SYCNQ0VAF6 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
SYCNQ0VAF6 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SYCNQ0VAF6 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
SYCNQ0VAF6 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
SYCNQ0VAF6 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
SYCNQ0VAF6 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
SYCNQ0VAF6 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC9.77□□□□□ -0.84
SYCNQ0VAF6 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
SYCNQ0VAF6 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC9.77□□□□□ -0.84
SYCNQ0VAF6 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms