Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 DSCAS-201ENST00000581836 553 ntTSL 4 BASIC18.95■□□□□ 0.62
COL16A1Q07092 C17orf62-234ENST00000584503 584 ntTSL 2 BASIC18.95■□□□□ 0.62
COL16A1Q07092 ZNF850-201ENST00000589390 523 ntTSL 3 BASIC18.95■□□□□ 0.62
COL16A1Q07092 AL035427.1-201ENST00000602441 387 ntTSL 3 BASIC18.95■□□□□ 0.62
COL16A1Q07092 POU5F1-207ENST00000606567 1236 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
COL16A1Q07092 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL16A1Q07092 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.95■□□□□ 0.62
COL16A1Q07092 TP63-206ENST00000392463 1386 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
COL16A1Q07092 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL16A1Q07092 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
COL16A1Q07092 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC18.94■□□□□ 0.62
COL16A1Q07092 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL16A1Q07092 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL16A1Q07092 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COL16A1Q07092 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
COL16A1Q07092 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL16A1Q07092 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL16A1Q07092 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC18.94■□□□□ 0.62
COL16A1Q07092 HSD3BP1-201ENST00000286193 1111 ntBASIC18.94■□□□□ 0.62
COL16A1Q07092 TRMT11-202ENST00000368332 1889 ntAPPRIS ALT1 TSL 2 BASIC18.94■□□□□ 0.62
COL16A1Q07092 TCEAL5-201ENST00000372680 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL16A1Q07092 AP000959.1-201ENST00000441759 977 ntTSL 3 BASIC18.94■□□□□ 0.62
COL16A1Q07092 METTL7AP1-201ENST00000547343 496 ntBASIC18.94■□□□□ 0.62
COL16A1Q07092 AC092720.1-202ENST00000565824 555 ntTSL 4 BASIC18.94■□□□□ 0.62
COL16A1Q07092 CR936218.2-201ENST00000574252 759 ntTSL 3 BASIC18.94■□□□□ 0.62
COL16A1Q07092 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COL16A1Q07092 PAX8-AS1-219ENST00000623306 840 ntTSL 5 BASIC18.94■□□□□ 0.62
COL16A1Q07092 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL16A1Q07092 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL16A1Q07092 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL16A1Q07092 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL16A1Q07092 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL16A1Q07092 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC18.94■□□□□ 0.62
COL16A1Q07092 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL16A1Q07092 GTF2A1L-201ENST00000403751 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL16A1Q07092 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COL16A1Q07092 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.93■□□□□ 0.62
COL16A1Q07092 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL16A1Q07092 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC18.93■□□□□ 0.62
COL16A1Q07092 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC18.93■□□□□ 0.62
COL16A1Q07092 ZWINT-202ENST00000361148 807 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
COL16A1Q07092 MRPL55-209ENST00000366735 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL16A1Q07092 RBP4-203ENST00000371469 814 ntTSL 5 BASIC18.93■□□□□ 0.62
COL16A1Q07092 RN7SL794P-201ENST00000469816 280 ntBASIC18.93■□□□□ 0.62
COL16A1Q07092 GIMAP6-202ENST00000493969 876 ntTSL 2 BASIC18.93■□□□□ 0.62
COL16A1Q07092 AC090907.2-201ENST00000559857 720 ntTSL 3 BASIC18.93■□□□□ 0.62
COL16A1Q07092 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC18.93■□□□□ 0.62
COL16A1Q07092 AC148476.1-201ENST00000622182 705 ntBASIC18.93■□□□□ 0.62
COL16A1Q07092 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC18.93■□□□□ 0.62
COL16A1Q07092 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC18.93■□□□□ 0.62
COL16A1Q07092 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL16A1Q07092 GUCY2EP-203ENST00000531117 1918 ntBASIC18.93■□□□□ 0.62
COL16A1Q07092 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL16A1Q07092 GPI-205ENST00000586425 1799 ntTSL 5 BASIC18.93■□□□□ 0.62
COL16A1Q07092 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COL16A1Q07092 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL16A1Q07092 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
COL16A1Q07092 MIR193A-201ENST00000384882 88 ntBASIC18.92■□□□□ 0.62
COL16A1Q07092 AC093495.1-201ENST00000420253 1067 ntTSL 4 BASIC18.92■□□□□ 0.62
COL16A1Q07092 CD37-203ENST00000426897 1204 ntTSL 2 BASIC18.92■□□□□ 0.62
COL16A1Q07092 AC005332.2-201ENST00000590010 930 ntBASIC18.92■□□□□ 0.62
COL16A1Q07092 CSH2-207ENST00000613718 666 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COL16A1Q07092 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL16A1Q07092 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COL16A1Q07092 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
COL16A1Q07092 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC18.92■□□□□ 0.62
COL16A1Q07092 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL16A1Q07092 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COL16A1Q07092 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COL16A1Q07092 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC18.92■□□□□ 0.62
COL16A1Q07092 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC18.92■□□□□ 0.62
COL16A1Q07092 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL16A1Q07092 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL16A1Q07092 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL16A1Q07092 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COL16A1Q07092 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL16A1Q07092 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COL16A1Q07092 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL16A1Q07092 APOBEC3B-204ENST00000407298 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL16A1Q07092 AL627095.1-201ENST00000414775 321 ntBASIC18.92■□□□□ 0.62
COL16A1Q07092 HLA-W-207ENST00000439514 771 ntBASIC18.92■□□□□ 0.62
COL16A1Q07092 AC079250.1-201ENST00000456046 531 ntBASIC18.92■□□□□ 0.62
COL16A1Q07092 AL358215.1-201ENST00000481350 482 ntTSL 5 BASIC18.92■□□□□ 0.62
COL16A1Q07092 RPL10P8-201ENST00000522888 313 ntBASIC18.92■□□□□ 0.62
COL16A1Q07092 C3orf84-203ENST00000545770 706 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
COL16A1Q07092 BX510359.7-201ENST00000619819 630 ntBASIC18.92■□□□□ 0.62
COL16A1Q07092 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL16A1Q07092 DMC1-207ENST00000616615 1595 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COL16A1Q07092 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL16A1Q07092 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL16A1Q07092 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.91■□□□□ 0.62
COL16A1Q07092 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
COL16A1Q07092 ACE3P-201ENST00000423435 1973 ntBASIC18.91■□□□□ 0.62
COL16A1Q07092 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL16A1Q07092 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL16A1Q07092 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL16A1Q07092 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL16A1Q07092 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC18.91■□□□□ 0.62
COL16A1Q07092 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
COL16A1Q07092 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms