Protein–RNA interactions for Protein: Q00610

CLTC, Clathrin heavy chain 1, humanhuman

Known RBP Predictions only

Length 1,675 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCQ00610 CBR3-AS1-202ENST00000427491 741 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CLTCQ00610 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC20.54■□□□□ 0.88
CLTCQ00610 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC20.54■□□□□ 0.88
CLTCQ00610 CBR3-AS1-207ENST00000608641 777 ntTSL 5 BASIC20.54■□□□□ 0.88
CLTCQ00610 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CLTCQ00610 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLTCQ00610 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CLTCQ00610 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CLTCQ00610 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC20.53■□□□□ 0.88
CLTCQ00610 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CLTCQ00610 GPN3-203ENST00000543199 1604 ntTSL 5 BASIC20.53■□□□□ 0.88
CLTCQ00610 MIF4GD-201ENST00000245551 1358 ntTSL 3 BASIC20.53■□□□□ 0.88
CLTCQ00610 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLTCQ00610 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CLTCQ00610 AL354702.1-201ENST00000442006 1960 ntBASIC20.53■□□□□ 0.88
CLTCQ00610 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC20.53■□□□□ 0.88
CLTCQ00610 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLTCQ00610 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC20.53■□□□□ 0.88
CLTCQ00610 LCK-206ENST00000373564 2137 ntTSL 5 BASIC20.53■□□□□ 0.88
CLTCQ00610 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC20.53■□□□□ 0.88
CLTCQ00610 BPIFA4P-201ENST00000375465 1203 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CLTCQ00610 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLTCQ00610 AHCYP3-201ENST00000420053 1279 ntBASIC20.53■□□□□ 0.88
CLTCQ00610 TONSL-AS1-201ENST00000442850 428 ntTSL 5 BASIC20.53■□□□□ 0.88
CLTCQ00610 HFE-209ENST00000461397 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLTCQ00610 AC108724.1-201ENST00000481669 352 ntBASIC20.53■□□□□ 0.88
CLTCQ00610 AC093700.1-201ENST00000503348 717 ntBASIC20.53■□□□□ 0.88
CLTCQ00610 AC112250.1-201ENST00000504640 745 ntBASIC20.53■□□□□ 0.88
CLTCQ00610 CDIPT-AS1-202ENST00000565014 729 ntTSL 2 BASIC20.53■□□□□ 0.88
CLTCQ00610 AC005786.2-201ENST00000592368 369 ntTSL 3 BASIC20.53■□□□□ 0.88
CLTCQ00610 FXYD3-206ENST00000603524 742 ntTSL 3 BASIC20.53■□□□□ 0.88
CLTCQ00610 FXYD3-211ENST00000604804 564 ntTSL 4 BASIC20.53■□□□□ 0.88
CLTCQ00610 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLTCQ00610 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC20.53■□□□□ 0.88
CLTCQ00610 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLTCQ00610 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC20.53■□□□□ 0.88
CLTCQ00610 AC018442.1-201ENST00000421439 2061 ntBASIC20.53■□□□□ 0.88
CLTCQ00610 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC20.53■□□□□ 0.88
CLTCQ00610 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC20.53■□□□□ 0.88
CLTCQ00610 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC20.53■□□□□ 0.88
CLTCQ00610 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLTCQ00610 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLTCQ00610 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLTCQ00610 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
CLTCQ00610 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CLTCQ00610 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
CLTCQ00610 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLTCQ00610 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLTCQ00610 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CLTCQ00610 RN7SL684P-201ENST00000465665 294 ntBASIC20.52■□□□□ 0.88
CLTCQ00610 RN7SL846P-201ENST00000467429 292 ntBASIC20.52■□□□□ 0.88
CLTCQ00610 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CLTCQ00610 AC091588.3-201ENST00000583442 770 ntTSL 3 BASIC20.52■□□□□ 0.88
CLTCQ00610 AC006207.1-201ENST00000637958 562 ntTSL 5 BASIC20.52■□□□□ 0.88
CLTCQ00610 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLTCQ00610 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CLTCQ00610 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLTCQ00610 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CLTCQ00610 AC215219.1-201ENST00000400706 1817 ntBASIC20.52■□□□□ 0.87
CLTCQ00610 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CLTCQ00610 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CLTCQ00610 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLTCQ00610 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLTCQ00610 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CLTCQ00610 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLTCQ00610 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC20.51■□□□□ 0.87
CLTCQ00610 AC006328.1-201ENST00000437571 379 ntBASIC20.51■□□□□ 0.87
CLTCQ00610 RN7SL523P-201ENST00000484401 298 ntBASIC20.51■□□□□ 0.87
CLTCQ00610 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC20.51■□□□□ 0.87
CLTCQ00610 ZNF677-210ENST00000601413 706 ntTSL 2 BASIC20.51■□□□□ 0.87
CLTCQ00610 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
CLTCQ00610 AC006986.1-201ENST00000612764 241 ntBASIC20.51■□□□□ 0.87
CLTCQ00610 Metazoa_SRP.63-201ENST00000617144 298 ntBASIC20.51■□□□□ 0.87
CLTCQ00610 APOBEC3A-201ENST00000249116 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLTCQ00610 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CLTCQ00610 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC20.51■□□□□ 0.87
CLTCQ00610 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC20.51■□□□□ 0.87
CLTCQ00610 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLTCQ00610 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLTCQ00610 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLTCQ00610 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CLTCQ00610 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLTCQ00610 LILRP2-202ENST00000413572 1383 ntBASIC20.51■□□□□ 0.87
CLTCQ00610 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CLTCQ00610 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC20.51■□□□□ 0.87
CLTCQ00610 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLTCQ00610 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLTCQ00610 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLTCQ00610 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLTCQ00610 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC20.51■□□□□ 0.87
CLTCQ00610 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC20.51■□□□□ 0.87
CLTCQ00610 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
CLTCQ00610 AC103592.1-201ENST00000394513 664 ntBASIC20.51■□□□□ 0.87
CLTCQ00610 GGTLC4P-201ENST00000402176 664 ntBASIC20.51■□□□□ 0.87
CLTCQ00610 MED15P3-201ENST00000413613 326 ntBASIC20.51■□□□□ 0.87
CLTCQ00610 HNRNPA1P25-201ENST00000422644 937 ntBASIC20.51■□□□□ 0.87
CLTCQ00610 AL773545.2-201ENST00000442149 472 ntBASIC20.51■□□□□ 0.87
CLTCQ00610 AC103923.1-201ENST00000453229 1228 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CLTCQ00610 DPY19L2P4-201ENST00000479881 442 ntBASIC20.51■□□□□ 0.87
CLTCQ00610 AC099328.1-201ENST00000498809 1030 ntBASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms