Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDKL1Q00532 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
CDKL1Q00532 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDKL1Q00532 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDKL1Q00532 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDKL1Q00532 TPM3P8-201ENST00000330554 643 ntBASIC14.5□□□□□ -0.09
CDKL1Q00532 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
CDKL1Q00532 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDKL1Q00532 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDKL1Q00532 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.5□□□□□ -0.09
CDKL1Q00532 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC14.5□□□□□ -0.09
CDKL1Q00532 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDKL1Q00532 SLC25A47P1-201ENST00000531577 414 ntBASIC14.5□□□□□ -0.09
CDKL1Q00532 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC14.5□□□□□ -0.09
CDKL1Q00532 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC14.5□□□□□ -0.09
CDKL1Q00532 MIR3197-201ENST00000582241 73 ntBASIC14.5□□□□□ -0.09
CDKL1Q00532 AC233724.13-201ENST00000598383 410 ntBASIC14.5□□□□□ -0.09
CDKL1Q00532 MIR6074-201ENST00000612054 107 ntBASIC14.5□□□□□ -0.09
CDKL1Q00532 AP001002.3-201ENST00000623482 206 ntBASIC14.5□□□□□ -0.09
CDKL1Q00532 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC14.5□□□□□ -0.09
CDKL1Q00532 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDKL1Q00532 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDKL1Q00532 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.5□□□□□ -0.09
CDKL1Q00532 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
CDKL1Q00532 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDKL1Q00532 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC14.5□□□□□ -0.09
CDKL1Q00532 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CDKL1Q00532 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
CDKL1Q00532 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDKL1Q00532 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.5□□□□□ -0.09
CDKL1Q00532 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDKL1Q00532 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDKL1Q00532 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CDKL1Q00532 AC130686.1-201ENST00000622936 2466 ntBASIC14.5□□□□□ -0.09
CDKL1Q00532 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CDKL1Q00532 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDKL1Q00532 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDKL1Q00532 SBF1P1-201ENST00000444527 5631 ntBASIC14.49□□□□□ -0.09
CDKL1Q00532 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC14.49□□□□□ -0.09
CDKL1Q00532 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDKL1Q00532 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDKL1Q00532 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
CDKL1Q00532 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDKL1Q00532 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.49□□□□□ -0.09
CDKL1Q00532 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDKL1Q00532 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
CDKL1Q00532 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDKL1Q00532 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDKL1Q00532 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDKL1Q00532 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
CDKL1Q00532 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDKL1Q00532 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC14.49□□□□□ -0.09
CDKL1Q00532 CD8B2-202ENST00000417670 633 ntBASIC14.49□□□□□ -0.09
CDKL1Q00532 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC14.49□□□□□ -0.09
CDKL1Q00532 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.49□□□□□ -0.09
CDKL1Q00532 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14.49□□□□□ -0.09
CDKL1Q00532 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDKL1Q00532 MYADML-201ENST00000474610 2147 ntBASIC14.49□□□□□ -0.09
CDKL1Q00532 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.49□□□□□ -0.09
CDKL1Q00532 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
CDKL1Q00532 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC14.49□□□□□ -0.09
CDKL1Q00532 AL022328.1-201ENST00000610050 478 ntBASIC14.49□□□□□ -0.09
CDKL1Q00532 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC14.49□□□□□ -0.09
CDKL1Q00532 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
CDKL1Q00532 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC14.49□□□□□ -0.09
CDKL1Q00532 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC14.49□□□□□ -0.09
CDKL1Q00532 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDKL1Q00532 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.49□□□□□ -0.09
CDKL1Q00532 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDKL1Q00532 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
CDKL1Q00532 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDKL1Q00532 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDKL1Q00532 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDKL1Q00532 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDKL1Q00532 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC14.49□□□□□ -0.09
CDKL1Q00532 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC14.49□□□□□ -0.09
CDKL1Q00532 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
CDKL1Q00532 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CDKL1Q00532 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDKL1Q00532 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDKL1Q00532 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDKL1Q00532 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDKL1Q00532 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDKL1Q00532 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC14.48□□□□□ -0.09
CDKL1Q00532 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDKL1Q00532 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.48□□□□□ -0.09
CDKL1Q00532 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDKL1Q00532 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CDKL1Q00532 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDKL1Q00532 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDKL1Q00532 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CDKL1Q00532 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.48□□□□□ -0.09
CDKL1Q00532 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
CDKL1Q00532 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDKL1Q00532 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC14.48□□□□□ -0.09
CDKL1Q00532 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDKL1Q00532 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
CDKL1Q00532 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDKL1Q00532 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDKL1Q00532 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms