Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
RAE1P78406 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
RAE1P78406 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RAE1P78406 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
RAE1P78406 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
RAE1P78406 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAE1P78406 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAE1P78406 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.89□□□□□ -0.19
RAE1P78406 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAE1P78406 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RAE1P78406 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
RAE1P78406 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAE1P78406 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC13.89□□□□□ -0.19
RAE1P78406 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
RAE1P78406 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RAE1P78406 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAE1P78406 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC13.89□□□□□ -0.19
RAE1P78406 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC13.89□□□□□ -0.19
RAE1P78406 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAE1P78406 GZMB-202ENST00000382540 816 ntTSL 5 BASIC13.89□□□□□ -0.19
RAE1P78406 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAE1P78406 MPV17-206ENST00000402722 827 ntTSL 3 BASIC13.89□□□□□ -0.19
RAE1P78406 HIST1H2BPS3-201ENST00000419683 341 ntBASIC13.89□□□□□ -0.19
RAE1P78406 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RAE1P78406 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC13.89□□□□□ -0.19
RAE1P78406 KRT17P7-201ENST00000451704 1104 ntBASIC13.89□□□□□ -0.19
RAE1P78406 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RAE1P78406 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC13.89□□□□□ -0.19
RAE1P78406 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RAE1P78406 CR383656.12-201ENST00000549567 513 ntBASIC13.89□□□□□ -0.19
RAE1P78406 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RAE1P78406 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC13.89□□□□□ -0.19
RAE1P78406 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RAE1P78406 AP006547.1-201ENST00000563435 692 ntBASIC13.89□□□□□ -0.19
RAE1P78406 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC13.89□□□□□ -0.19
RAE1P78406 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.89□□□□□ -0.19
RAE1P78406 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RAE1P78406 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAE1P78406 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.89□□□□□ -0.19
RAE1P78406 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAE1P78406 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
RAE1P78406 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.89□□□□□ -0.19
RAE1P78406 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAE1P78406 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAE1P78406 AL157996.1-201ENST00000624684 2299 ntBASIC13.89□□□□□ -0.19
RAE1P78406 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
RAE1P78406 TMBIM7P-202ENST00000641474 1516 ntBASIC13.89□□□□□ -0.19
RAE1P78406 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAE1P78406 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAE1P78406 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAE1P78406 E2F3P2-201ENST00000447755 1422 ntBASIC13.89□□□□□ -0.19
RAE1P78406 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAE1P78406 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAE1P78406 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAE1P78406 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RAE1P78406 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC13.88□□□□□ -0.19
RAE1P78406 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAE1P78406 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAE1P78406 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
RAE1P78406 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC13.88□□□□□ -0.19
RAE1P78406 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAE1P78406 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAE1P78406 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAE1P78406 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAE1P78406 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC13.88□□□□□ -0.19
RAE1P78406 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAE1P78406 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAE1P78406 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAE1P78406 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.88□□□□□ -0.19
RAE1P78406 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAE1P78406 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAE1P78406 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RAE1P78406 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAE1P78406 EDF1-203ENST00000371649 790 ntTSL 2 BASIC13.88□□□□□ -0.19
RAE1P78406 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAE1P78406 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAE1P78406 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC13.88□□□□□ -0.19
RAE1P78406 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC13.88□□□□□ -0.19
RAE1P78406 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC13.88□□□□□ -0.19
RAE1P78406 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC13.88□□□□□ -0.19
RAE1P78406 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC13.88□□□□□ -0.19
RAE1P78406 GAS5-209ENST00000430245 723 ntTSL 3 BASIC13.88□□□□□ -0.19
RAE1P78406 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC13.88□□□□□ -0.19
RAE1P78406 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RAE1P78406 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
RAE1P78406 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RAE1P78406 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
RAE1P78406 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAE1P78406 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC13.88□□□□□ -0.19
RAE1P78406 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC13.88□□□□□ -0.19
RAE1P78406 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RAE1P78406 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
RAE1P78406 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RAE1P78406 MIR4783-201ENST00000580343 82 ntBASIC13.88□□□□□ -0.19
RAE1P78406 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC13.88□□□□□ -0.19
RAE1P78406 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC13.88□□□□□ -0.19
RAE1P78406 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
RAE1P78406 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC13.88□□□□□ -0.19
RAE1P78406 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
RAE1P78406 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms