Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC13.43□□□□□ -0.26
CXCR4P61073 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.43□□□□□ -0.26
CXCR4P61073 SNHG9-202ENST00000564014 471 ntBASIC13.43□□□□□ -0.26
CXCR4P61073 DUX4L47-201ENST00000566374 394 ntBASIC13.43□□□□□ -0.26
CXCR4P61073 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CXCR4P61073 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.43□□□□□ -0.26
CXCR4P61073 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.43□□□□□ -0.26
CXCR4P61073 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
CXCR4P61073 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CXCR4P61073 AL136317.3-201ENST00000618497 906 ntBASIC13.43□□□□□ -0.26
CXCR4P61073 Z92544.3-201ENST00000624747 417 ntBASIC13.43□□□□□ -0.26
CXCR4P61073 RAB34-223ENST00000636154 730 ntTSL 2 BASIC13.43□□□□□ -0.26
CXCR4P61073 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CXCR4P61073 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CXCR4P61073 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
CXCR4P61073 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CXCR4P61073 DLX4-206ENST00000611342 1662 ntBASIC13.43□□□□□ -0.26
CXCR4P61073 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CXCR4P61073 AL136172.1-201ENST00000598590 1394 ntBASIC13.43□□□□□ -0.26
CXCR4P61073 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
CXCR4P61073 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CXCR4P61073 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CXCR4P61073 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CXCR4P61073 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.43□□□□□ -0.26
CXCR4P61073 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CXCR4P61073 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CXCR4P61073 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC13.42□□□□□ -0.26
CXCR4P61073 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CXCR4P61073 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CXCR4P61073 AC087499.5-201ENST00000452760 1342 ntBASIC13.42□□□□□ -0.26
CXCR4P61073 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
CXCR4P61073 MRPL37P1-201ENST00000592451 1337 ntBASIC13.42□□□□□ -0.26
CXCR4P61073 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
CXCR4P61073 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CXCR4P61073 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CXCR4P61073 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC13.42□□□□□ -0.26
CXCR4P61073 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CXCR4P61073 MARK2P9-201ENST00000430958 1727 ntBASIC13.42□□□□□ -0.26
CXCR4P61073 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.42□□□□□ -0.26
CXCR4P61073 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CXCR4P61073 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
CXCR4P61073 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
CXCR4P61073 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CXCR4P61073 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CXCR4P61073 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
CXCR4P61073 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CXCR4P61073 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CXCR4P61073 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CXCR4P61073 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
CXCR4P61073 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CXCR4P61073 AL353779.1-201ENST00000434793 351 ntBASIC13.42□□□□□ -0.26
CXCR4P61073 AP000347.1-202ENST00000435868 847 ntBASIC13.42□□□□□ -0.26
CXCR4P61073 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.42□□□□□ -0.26
CXCR4P61073 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC13.42□□□□□ -0.26
CXCR4P61073 AP006288.1-201ENST00000446065 395 ntBASIC13.42□□□□□ -0.26
CXCR4P61073 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC13.42□□□□□ -0.26
CXCR4P61073 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
CXCR4P61073 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13.42□□□□□ -0.26
CXCR4P61073 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC13.42□□□□□ -0.26
CXCR4P61073 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CXCR4P61073 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.42□□□□□ -0.26
CXCR4P61073 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CXCR4P61073 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CXCR4P61073 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC13.42□□□□□ -0.26
CXCR4P61073 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CXCR4P61073 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC13.42□□□□□ -0.26
CXCR4P61073 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CXCR4P61073 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CXCR4P61073 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
CXCR4P61073 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
CXCR4P61073 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC13.42□□□□□ -0.26
CXCR4P61073 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CXCR4P61073 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CXCR4P61073 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CXCR4P61073 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CXCR4P61073 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC13.41□□□□□ -0.26
CXCR4P61073 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
CXCR4P61073 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CXCR4P61073 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.41□□□□□ -0.26
CXCR4P61073 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
CXCR4P61073 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.41□□□□□ -0.26
CXCR4P61073 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CXCR4P61073 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CXCR4P61073 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CXCR4P61073 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
CXCR4P61073 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC13.41□□□□□ -0.26
CXCR4P61073 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CXCR4P61073 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CXCR4P61073 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CXCR4P61073 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
CXCR4P61073 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC13.41□□□□□ -0.26
CXCR4P61073 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC13.41□□□□□ -0.26
CXCR4P61073 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC13.41□□□□□ -0.26
CXCR4P61073 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC13.41□□□□□ -0.26
CXCR4P61073 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CXCR4P61073 LY6E-204ENST00000519546 971 ntTSL 2 BASIC13.41□□□□□ -0.26
CXCR4P61073 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.41□□□□□ -0.26
CXCR4P61073 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC13.41□□□□□ -0.26
CXCR4P61073 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC13.41□□□□□ -0.26
CXCR4P61073 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms