Protein–RNA interactions for Protein: P59665

DEFA1, Neutrophil defensin 1, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA1P59665 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC12.9□□□□□ -0.34
DEFA1P59665 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC12.9□□□□□ -0.34
DEFA1P59665 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC12.9□□□□□ -0.34
DEFA1P59665 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC12.9□□□□□ -0.34
DEFA1P59665 SHPRH-202ENST00000367503 5237 ntTSL 5 BASIC12.9□□□□□ -0.34
DEFA1P59665 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC12.9□□□□□ -0.35
DEFA1P59665 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
DEFA1P59665 PLA2G6-202ENST00000335539 3060 ntTSL 5 BASIC12.9□□□□□ -0.35
DEFA1P59665 AGAP12P-201ENST00000585227 2359 ntBASIC12.89□□□□□ -0.35
DEFA1P59665 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
DEFA1P59665 ZNF773-205ENST00000599847 5832 ntTSL 2 BASIC12.89□□□□□ -0.35
DEFA1P59665 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
DEFA1P59665 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
DEFA1P59665 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
DEFA1P59665 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
DEFA1P59665 BTNL8-201ENST00000231229 2229 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
DEFA1P59665 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC12.89□□□□□ -0.35
DEFA1P59665 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC12.89□□□□□ -0.35
DEFA1P59665 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC12.89□□□□□ -0.35
DEFA1P59665 HDLBP-204ENST00000391976 4489 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
DEFA1P59665 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
DEFA1P59665 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
DEFA1P59665 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC12.89□□□□□ -0.35
DEFA1P59665 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
DEFA1P59665 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
DEFA1P59665 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
DEFA1P59665 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
DEFA1P59665 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
DEFA1P59665 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
DEFA1P59665 AZGP1P1-201ENST00000411909 902 ntBASIC12.89□□□□□ -0.35
DEFA1P59665 ATP6V0CP3-201ENST00000417255 467 ntBASIC12.89□□□□□ -0.35
DEFA1P59665 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC12.89□□□□□ -0.35
DEFA1P59665 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC12.89□□□□□ -0.35
DEFA1P59665 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC12.89□□□□□ -0.35
DEFA1P59665 FXR1-221ENST00000491674 365 ntTSL 2 BASIC12.89□□□□□ -0.35
DEFA1P59665 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC12.89□□□□□ -0.35
DEFA1P59665 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC12.89□□□□□ -0.35
DEFA1P59665 AL136038.3-201ENST00000561909 1096 ntBASIC12.89□□□□□ -0.35
DEFA1P59665 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC12.89□□□□□ -0.35
DEFA1P59665 MTDHP3-201ENST00000594186 672 ntBASIC12.89□□□□□ -0.35
DEFA1P59665 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC12.89□□□□□ -0.35
DEFA1P59665 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC12.89□□□□□ -0.35
DEFA1P59665 C19orf12-208ENST00000614091 4489 ntAPPRIS P1 TSL 4 BASIC12.89□□□□□ -0.35
DEFA1P59665 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
DEFA1P59665 GSTM3-201ENST00000256594 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
DEFA1P59665 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
DEFA1P59665 AC102953.2-201ENST00000609755 3026 ntBASIC12.89□□□□□ -0.35
DEFA1P59665 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
DEFA1P59665 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
DEFA1P59665 SPECC1-206ENST00000395530 8133 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
DEFA1P59665 COL4A6-209ENST00000545689 6380 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
DEFA1P59665 VWA8-203ENST00000379310 7147 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
DEFA1P59665 MYO1C-202ENST00000361007 4734 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
DEFA1P59665 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC12.89□□□□□ -0.35
DEFA1P59665 C10orf105-201ENST00000398786 4730 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
DEFA1P59665 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
DEFA1P59665 SEC31A-208ENST00000448323 4255 ntAPPRIS P4 TSL 5 BASIC12.89□□□□□ -0.35
DEFA1P59665 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
DEFA1P59665 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
DEFA1P59665 MAN2C1-242ENST00000569482 3177 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
DEFA1P59665 CCDC187-204ENST00000624277 3918 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
DEFA1P59665 JDP2-203ENST00000435893 5401 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
DEFA1P59665 PCDHGA6-201ENST00000517434 4775 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
DEFA1P59665 PNPLA7-202ENST00000406427 4806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
DEFA1P59665 ATP13A2-203ENST00000452699 3981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
DEFA1P59665 KRT8P35-201ENST00000483942 1338 ntBASIC12.88□□□□□ -0.35
DEFA1P59665 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
DEFA1P59665 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC12.88□□□□□ -0.35
DEFA1P59665 AOC3-201ENST00000308423 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
DEFA1P59665 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
DEFA1P59665 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
DEFA1P59665 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
DEFA1P59665 ANKRD36B-201ENST00000258459 5986 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
DEFA1P59665 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
DEFA1P59665 SFTPA1-202ENST00000419470 2210 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
DEFA1P59665 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC12.88□□□□□ -0.35
DEFA1P59665 ABCC3-201ENST00000285238 5716 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
DEFA1P59665 ZKSCAN3-203ENST00000377255 4799 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
DEFA1P59665 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
DEFA1P59665 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
DEFA1P59665 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC12.88□□□□□ -0.35
DEFA1P59665 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC12.88□□□□□ -0.35
DEFA1P59665 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC12.88□□□□□ -0.35
DEFA1P59665 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
DEFA1P59665 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC12.88□□□□□ -0.35
DEFA1P59665 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC12.88□□□□□ -0.35
DEFA1P59665 KRT17P5-202ENST00000444070 2552 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
DEFA1P59665 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC12.88□□□□□ -0.35
DEFA1P59665 C10orf90-202ENST00000356858 2995 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
DEFA1P59665 MAST4-202ENST00000403625 10711 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
DEFA1P59665 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC12.88□□□□□ -0.35
DEFA1P59665 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
DEFA1P59665 PCSK2-202ENST00000377899 4674 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
DEFA1P59665 MADD-201ENST00000311027 5990 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
DEFA1P59665 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
DEFA1P59665 CHD3-203ENST00000380358 7356 ntTSL 2 BASIC12.88□□□□□ -0.35
DEFA1P59665 POC1B-GALNT4-202ENST00000548729 5436 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
DEFA1P59665 CEP68-201ENST00000260569 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
DEFA1P59665 ZNF606-201ENST00000341164 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
DEFA1P59665 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms