Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RIPPLY3P57055 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RIPPLY3P57055 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC12.29□□□□□ -0.44
RIPPLY3P57055 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC12.29□□□□□ -0.44
RIPPLY3P57055 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
RIPPLY3P57055 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RIPPLY3P57055 KRT8P39-201ENST00000396270 1433 ntBASIC12.28□□□□□ -0.44
RIPPLY3P57055 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC12.28□□□□□ -0.44
RIPPLY3P57055 LINC01815-202ENST00000641468 1409 ntBASIC12.28□□□□□ -0.44
RIPPLY3P57055 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
RIPPLY3P57055 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RIPPLY3P57055 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
RIPPLY3P57055 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RIPPLY3P57055 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
RIPPLY3P57055 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
RIPPLY3P57055 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
RIPPLY3P57055 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RIPPLY3P57055 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
RIPPLY3P57055 AC007191.1-201ENST00000623179 2995 ntBASIC12.28□□□□□ -0.44
RIPPLY3P57055 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RIPPLY3P57055 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
RIPPLY3P57055 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RIPPLY3P57055 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
RIPPLY3P57055 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
RIPPLY3P57055 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
RIPPLY3P57055 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RIPPLY3P57055 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RIPPLY3P57055 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
RIPPLY3P57055 GNG4-201ENST00000366597 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RIPPLY3P57055 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RIPPLY3P57055 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RIPPLY3P57055 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC12.28□□□□□ -0.44
RIPPLY3P57055 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RIPPLY3P57055 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
RIPPLY3P57055 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC12.28□□□□□ -0.44
RIPPLY3P57055 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RIPPLY3P57055 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC12.28□□□□□ -0.44
RIPPLY3P57055 KRT8P30-201ENST00000432100 650 ntBASIC12.28□□□□□ -0.44
RIPPLY3P57055 FAM58BP-201ENST00000439056 645 ntBASIC12.28□□□□□ -0.44
RIPPLY3P57055 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC12.28□□□□□ -0.44
RIPPLY3P57055 PGAM1P12-201ENST00000505622 748 ntBASIC12.28□□□□□ -0.44
RIPPLY3P57055 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC12.28□□□□□ -0.44
RIPPLY3P57055 HNRNPA1P36-201ENST00000521313 955 ntBASIC12.28□□□□□ -0.44
RIPPLY3P57055 AP000911.2-201ENST00000534330 502 ntBASIC12.28□□□□□ -0.44
RIPPLY3P57055 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC12.28□□□□□ -0.44
RIPPLY3P57055 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RIPPLY3P57055 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RIPPLY3P57055 AC068831.5-201ENST00000557387 328 ntBASIC12.28□□□□□ -0.44
RIPPLY3P57055 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
RIPPLY3P57055 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC12.28□□□□□ -0.44
RIPPLY3P57055 AC012593.1-214ENST00000586952 767 ntTSL 5 BASIC12.28□□□□□ -0.44
RIPPLY3P57055 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
RIPPLY3P57055 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
RIPPLY3P57055 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC12.28□□□□□ -0.44
RIPPLY3P57055 AC012073.1-201ENST00000606114 1108 ntBASIC12.28□□□□□ -0.44
RIPPLY3P57055 AC021321.1-201ENST00000607397 1113 ntBASIC12.28□□□□□ -0.44
RIPPLY3P57055 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC12.28□□□□□ -0.44
RIPPLY3P57055 AC090510.3-201ENST00000615831 821 ntBASIC12.28□□□□□ -0.44
RIPPLY3P57055 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC12.28□□□□□ -0.44
RIPPLY3P57055 AL162426.1-201ENST00000624141 743 ntBASIC12.28□□□□□ -0.44
RIPPLY3P57055 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
RIPPLY3P57055 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC12.28□□□□□ -0.44
RIPPLY3P57055 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC12.28□□□□□ -0.44
RIPPLY3P57055 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RIPPLY3P57055 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RIPPLY3P57055 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC12.28□□□□□ -0.44
RIPPLY3P57055 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC12.28□□□□□ -0.44
RIPPLY3P57055 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
RIPPLY3P57055 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
RIPPLY3P57055 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RIPPLY3P57055 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
RIPPLY3P57055 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RIPPLY3P57055 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RIPPLY3P57055 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RIPPLY3P57055 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC12.28□□□□□ -0.44
RIPPLY3P57055 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
RIPPLY3P57055 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC12.28□□□□□ -0.44
RIPPLY3P57055 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RIPPLY3P57055 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
RIPPLY3P57055 CYP2AB1P-202ENST00000454440 1456 ntBASIC12.27□□□□□ -0.44
RIPPLY3P57055 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC12.27□□□□□ -0.44
RIPPLY3P57055 AC126177.1-201ENST00000547829 2218 ntBASIC12.27□□□□□ -0.44
RIPPLY3P57055 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC12.27□□□□□ -0.44
RIPPLY3P57055 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.44
RIPPLY3P57055 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
RIPPLY3P57055 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC12.27□□□□□ -0.44
RIPPLY3P57055 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC12.27□□□□□ -0.44
RIPPLY3P57055 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
RIPPLY3P57055 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
RIPPLY3P57055 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
RIPPLY3P57055 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
RIPPLY3P57055 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
RIPPLY3P57055 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
RIPPLY3P57055 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RIPPLY3P57055 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
RIPPLY3P57055 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
RIPPLY3P57055 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RIPPLY3P57055 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
RIPPLY3P57055 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RIPPLY3P57055 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms