Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 GAS5-209ENST00000430245 723 ntTSL 3 BASIC10.94□□□□□ -0.66
CMC4P56277 ACTBP11-201ENST00000436287 1126 ntBASIC10.94□□□□□ -0.66
CMC4P56277 RPSAP36-202ENST00000494591 1261 ntBASIC10.94□□□□□ -0.66
CMC4P56277 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC10.94□□□□□ -0.66
CMC4P56277 AC126915.1-201ENST00000522847 1038 ntBASIC10.94□□□□□ -0.66
CMC4P56277 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC10.94□□□□□ -0.66
CMC4P56277 RIT1-205ENST00000539040 919 ntTSL 2 BASIC10.94□□□□□ -0.66
CMC4P56277 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC10.94□□□□□ -0.66
CMC4P56277 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC10.94□□□□□ -0.66
CMC4P56277 MIR6720-201ENST00000611664 98 ntBASIC10.94□□□□□ -0.66
CMC4P56277 AC009542.2-202ENST00000619004 1067 ntBASIC10.94□□□□□ -0.66
CMC4P56277 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CMC4P56277 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
CMC4P56277 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC10.94□□□□□ -0.66
CMC4P56277 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CMC4P56277 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC10.94□□□□□ -0.66
CMC4P56277 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC10.94□□□□□ -0.66
CMC4P56277 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC10.94□□□□□ -0.66
CMC4P56277 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CMC4P56277 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CMC4P56277 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC10.94□□□□□ -0.66
CMC4P56277 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC10.94□□□□□ -0.66
CMC4P56277 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
CMC4P56277 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
CMC4P56277 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CMC4P56277 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
CMC4P56277 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
CMC4P56277 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CMC4P56277 AMT-239ENST00000636865 1914 ntTSL 5 BASIC10.94□□□□□ -0.66
CMC4P56277 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
CMC4P56277 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC10.93□□□□□ -0.66
CMC4P56277 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CMC4P56277 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
CMC4P56277 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CMC4P56277 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
CMC4P56277 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
CMC4P56277 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
CMC4P56277 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
CMC4P56277 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
CMC4P56277 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC10.93□□□□□ -0.66
CMC4P56277 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
CMC4P56277 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CMC4P56277 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
CMC4P56277 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC10.93□□□□□ -0.66
CMC4P56277 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
CMC4P56277 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CMC4P56277 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CMC4P56277 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
CMC4P56277 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC10.93□□□□□ -0.66
CMC4P56277 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
CMC4P56277 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CMC4P56277 AL008718.2-201ENST00000609206 1313 ntBASIC10.93□□□□□ -0.66
CMC4P56277 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
CMC4P56277 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
CMC4P56277 AC073957.3-201ENST00000609998 6758 ntBASIC10.93□□□□□ -0.66
CMC4P56277 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
CMC4P56277 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
CMC4P56277 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
CMC4P56277 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CMC4P56277 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
CMC4P56277 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC10.93□□□□□ -0.66
CMC4P56277 OLR1-203ENST00000432556 950 ntTSL 2 BASIC10.93□□□□□ -0.66
CMC4P56277 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
CMC4P56277 GOLGA2P4-201ENST00000441462 777 ntBASIC10.93□□□□□ -0.66
CMC4P56277 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC10.93□□□□□ -0.66
CMC4P56277 AL591846.1-201ENST00000451736 433 ntBASIC10.93□□□□□ -0.66
CMC4P56277 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC10.93□□□□□ -0.66
CMC4P56277 FAM86HP-204ENST00000513466 959 ntBASIC10.93□□□□□ -0.66
CMC4P56277 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC10.93□□□□□ -0.66
CMC4P56277 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC10.93□□□□□ -0.66
CMC4P56277 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC10.93□□□□□ -0.66
CMC4P56277 SORD2P-201ENST00000558556 1069 ntBASIC10.93□□□□□ -0.66
CMC4P56277 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC10.93□□□□□ -0.66
CMC4P56277 AC009955.4-201ENST00000597192 544 ntBASIC10.93□□□□□ -0.66
CMC4P56277 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
CMC4P56277 AL162426.1-201ENST00000624141 743 ntBASIC10.93□□□□□ -0.66
CMC4P56277 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CMC4P56277 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CMC4P56277 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
CMC4P56277 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
CMC4P56277 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CMC4P56277 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC10.93□□□□□ -0.66
CMC4P56277 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CMC4P56277 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC10.93□□□□□ -0.66
CMC4P56277 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
CMC4P56277 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
CMC4P56277 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
CMC4P56277 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CMC4P56277 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CMC4P56277 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
CMC4P56277 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
CMC4P56277 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CMC4P56277 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CMC4P56277 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
CMC4P56277 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CMC4P56277 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CMC4P56277 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CMC4P56277 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC10.93□□□□□ -0.66
CMC4P56277 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CMC4P56277 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms