Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATXN3P54252 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ATXN3P54252 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ATXN3P54252 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATXN3P54252 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ATXN3P54252 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATXN3P54252 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATXN3P54252 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATXN3P54252 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC15.13■□□□□ 0.01
ATXN3P54252 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
ATXN3P54252 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC15.13■□□□□ 0.01
ATXN3P54252 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ATXN3P54252 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATXN3P54252 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.13■□□□□ 0.01
ATXN3P54252 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.13■□□□□ 0.01
ATXN3P54252 AL008707.1-201ENST00000422498 534 ntBASIC15.13■□□□□ 0.01
ATXN3P54252 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC15.13■□□□□ 0.01
ATXN3P54252 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC15.13■□□□□ 0.01
ATXN3P54252 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
ATXN3P54252 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ATXN3P54252 HSPB1P2-201ENST00000448722 546 ntBASIC15.13■□□□□ 0.01
ATXN3P54252 AL023775.1-201ENST00000454907 1746 ntBASIC15.13■□□□□ 0.01
ATXN3P54252 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.13■□□□□ 0.01
ATXN3P54252 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC15.13■□□□□ 0.01
ATXN3P54252 AC091544.8-201ENST00000619490 361 ntBASIC15.13■□□□□ 0.01
ATXN3P54252 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC15.13■□□□□ 0.01
ATXN3P54252 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
ATXN3P54252 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ATXN3P54252 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ATXN3P54252 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.13■□□□□ 0.01
ATXN3P54252 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.13■□□□□ 0.01
ATXN3P54252 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATXN3P54252 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
ATXN3P54252 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ATXN3P54252 AC010327.5-201ENST00000586923 3061 ntBASIC15.13■□□□□ 0.01
ATXN3P54252 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
ATXN3P54252 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATXN3P54252 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATXN3P54252 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.12■□□□□ 0.01
ATXN3P54252 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATXN3P54252 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ATXN3P54252 AC126365.1-201ENST00000578585 1514 ntBASIC15.12■□□□□ 0.01
ATXN3P54252 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATXN3P54252 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATXN3P54252 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATXN3P54252 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATXN3P54252 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.12■□□□□ 0.01
ATXN3P54252 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.12■□□□□ 0.01
ATXN3P54252 GRK6P1-201ENST00000400595 1711 ntBASIC15.12■□□□□ 0.01
ATXN3P54252 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
ATXN3P54252 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.12■□□□□ 0.01
ATXN3P54252 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC15.12■□□□□ 0.01
ATXN3P54252 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATXN3P54252 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ATXN3P54252 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATXN3P54252 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATXN3P54252 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
ATXN3P54252 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
ATXN3P54252 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC15.12■□□□□ 0.01
ATXN3P54252 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.12■□□□□ 0.01
ATXN3P54252 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
ATXN3P54252 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ATXN3P54252 RNU1-114P-201ENST00000365297 166 ntBASIC15.12■□□□□ 0.01
ATXN3P54252 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATXN3P54252 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.12■□□□□ 0.01
ATXN3P54252 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC15.12■□□□□ 0.01
ATXN3P54252 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ATXN3P54252 CYP46A4P-201ENST00000414953 267 ntBASIC15.12■□□□□ 0.01
ATXN3P54252 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATXN3P54252 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC15.12■□□□□ 0.01
ATXN3P54252 FAM8A4P-201ENST00000435433 1213 ntBASIC15.12■□□□□ 0.01
ATXN3P54252 RN7SL11P-201ENST00000471305 293 ntBASIC15.12■□□□□ 0.01
ATXN3P54252 GAPDHP40-201ENST00000505218 1006 ntBASIC15.12■□□□□ 0.01
ATXN3P54252 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC15.12■□□□□ 0.01
ATXN3P54252 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ATXN3P54252 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC15.12■□□□□ 0.01
ATXN3P54252 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC15.12■□□□□ 0.01
ATXN3P54252 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.12■□□□□ 0.01
ATXN3P54252 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC15.12■□□□□ 0.01
ATXN3P54252 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.12■□□□□ 0.01
ATXN3P54252 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATXN3P54252 U62317.3-201ENST00000608319 855 ntBASIC15.12■□□□□ 0.01
ATXN3P54252 AP001505.2-201ENST00000616815 443 ntBASIC15.12■□□□□ 0.01
ATXN3P54252 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.12■□□□□ 0.01
ATXN3P54252 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC15.12■□□□□ 0.01
ATXN3P54252 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATXN3P54252 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATXN3P54252 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
ATXN3P54252 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATXN3P54252 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
ATXN3P54252 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ATXN3P54252 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ATXN3P54252 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ATXN3P54252 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATXN3P54252 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATXN3P54252 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATXN3P54252 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATXN3P54252 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATXN3P54252 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATXN3P54252 AC107918.4-201ENST00000641966 3141 ntBASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms